Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RTRAFQ9CQE8 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Gm6659-201ENSMUST00000174752 547 ntBASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 AC121577.1-201ENSMUST00000227302 707 ntBASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
RTRAFQ9CQE8 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Gm18246-201ENSMUST00000221023 728 ntBASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RTRAFQ9CQE8 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
RTRAFQ9CQE8 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RTRAFQ9CQE8 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms