Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Gm43575-201ENSMUST00000196420 516 ntBASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Gm10175-201ENSMUST00000086013 645 ntBASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim8Q99PJ2 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Gm15957-201ENSMUST00000118893 974 ntBASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Gm11025-201ENSMUST00000140773 466 ntBASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Gm25911-201ENSMUST00000157621 56 ntBASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Gm2756-201ENSMUST00000195851 400 ntBASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim8Q99PJ2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim8Q99PJ2 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms