Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RtcbQ99LF4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RtcbQ99LF4 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RtcbQ99LF4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RtcbQ99LF4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RtcbQ99LF4 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RtcbQ99LF4 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC16.91■□□□□ 0.3
RtcbQ99LF4 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RtcbQ99LF4 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.9■□□□□ 0.3
RtcbQ99LF4 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RtcbQ99LF4 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RtcbQ99LF4 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.9■□□□□ 0.3
RtcbQ99LF4 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RtcbQ99LF4 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RtcbQ99LF4 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RtcbQ99LF4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.9■□□□□ 0.3
RtcbQ99LF4 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.9■□□□□ 0.3
RtcbQ99LF4 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
RtcbQ99LF4 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RtcbQ99LF4 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RtcbQ99LF4 Gm17376-201ENSMUST00000166016 84 ntBASIC16.9■□□□□ 0.3
RtcbQ99LF4 Mir7070-201ENSMUST00000183657 86 ntBASIC16.9■□□□□ 0.3
RtcbQ99LF4 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC16.9■□□□□ 0.3
RtcbQ99LF4 Gm3786-201ENSMUST00000202659 378 ntBASIC16.9■□□□□ 0.3
RtcbQ99LF4 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.9■□□□□ 0.3
RtcbQ99LF4 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RtcbQ99LF4 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC16.9■□□□□ 0.3
RtcbQ99LF4 AC134254.1-201ENSMUST00000221362 167 ntBASIC16.9■□□□□ 0.3
RtcbQ99LF4 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RtcbQ99LF4 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RtcbQ99LF4 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RtcbQ99LF4 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RtcbQ99LF4 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.9■□□□□ 0.3
RtcbQ99LF4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RtcbQ99LF4 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RtcbQ99LF4 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RtcbQ99LF4 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RtcbQ99LF4 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RtcbQ99LF4 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RtcbQ99LF4 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RtcbQ99LF4 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.89■□□□□ 0.3
RtcbQ99LF4 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RtcbQ99LF4 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RtcbQ99LF4 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
RtcbQ99LF4 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RtcbQ99LF4 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RtcbQ99LF4 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RtcbQ99LF4 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RtcbQ99LF4 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RtcbQ99LF4 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RtcbQ99LF4 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
RtcbQ99LF4 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RtcbQ99LF4 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RtcbQ99LF4 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RtcbQ99LF4 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RtcbQ99LF4 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC16.89■□□□□ 0.29
RtcbQ99LF4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RtcbQ99LF4 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RtcbQ99LF4 Gm6082-201ENSMUST00000215204 454 ntBASIC16.89■□□□□ 0.29
RtcbQ99LF4 Gm7046-201ENSMUST00000221351 977 ntBASIC16.89■□□□□ 0.29
RtcbQ99LF4 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RtcbQ99LF4 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RtcbQ99LF4 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RtcbQ99LF4 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.89■□□□□ 0.29
RtcbQ99LF4 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RtcbQ99LF4 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RtcbQ99LF4 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.89■□□□□ 0.29
RtcbQ99LF4 Abhd6-203ENSMUST00000225234 1958 ntBASIC16.89■□□□□ 0.29
RtcbQ99LF4 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RtcbQ99LF4 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RtcbQ99LF4 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC16.89■□□□□ 0.29
RtcbQ99LF4 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RtcbQ99LF4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RtcbQ99LF4 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RtcbQ99LF4 Gm18630-201ENSMUST00000222109 1397 ntBASIC16.89■□□□□ 0.29
RtcbQ99LF4 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RtcbQ99LF4 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RtcbQ99LF4 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RtcbQ99LF4 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RtcbQ99LF4 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RtcbQ99LF4 Gm2231-201ENSMUST00000125661 612 ntBASIC16.88■□□□□ 0.29
RtcbQ99LF4 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC16.88■□□□□ 0.29
RtcbQ99LF4 Gm25668-201ENSMUST00000157700 129 ntBASIC16.88■□□□□ 0.29
RtcbQ99LF4 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC16.88■□□□□ 0.29
RtcbQ99LF4 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RtcbQ99LF4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RtcbQ99LF4 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RtcbQ99LF4 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RtcbQ99LF4 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RtcbQ99LF4 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RtcbQ99LF4 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.88■□□□□ 0.29
RtcbQ99LF4 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RtcbQ99LF4 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC16.88■□□□□ 0.29
RtcbQ99LF4 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RtcbQ99LF4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RtcbQ99LF4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.88■□□□□ 0.29
RtcbQ99LF4 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RtcbQ99LF4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RtcbQ99LF4 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms