Protein–RNA interactions for Protein: Q99KG7

Hps4, Hermansky-Pudlak syndrome 4 protein homolog, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps4Q99KG7 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hps4Q99KG7 Gm29608-201ENSMUST00000190444 463 ntBASIC16.13■□□□□ 0.17
Hps4Q99KG7 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hps4Q99KG7 Gm17870-201ENSMUST00000219489 1174 ntBASIC16.13■□□□□ 0.17
Hps4Q99KG7 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC16.13■□□□□ 0.17
Hps4Q99KG7 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hps4Q99KG7 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hps4Q99KG7 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Hps4Q99KG7 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hps4Q99KG7 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hps4Q99KG7 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hps4Q99KG7 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hps4Q99KG7 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hps4Q99KG7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Hps4Q99KG7 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hps4Q99KG7 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hps4Q99KG7 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.13■□□□□ 0.17
Hps4Q99KG7 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.13■□□□□ 0.17
Hps4Q99KG7 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hps4Q99KG7 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16.13■□□□□ 0.17
Hps4Q99KG7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.12■□□□□ 0.17
Hps4Q99KG7 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hps4Q99KG7 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC16.12■□□□□ 0.17
Hps4Q99KG7 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.12■□□□□ 0.17
Hps4Q99KG7 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hps4Q99KG7 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hps4Q99KG7 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hps4Q99KG7 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Hps4Q99KG7 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Hps4Q99KG7 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hps4Q99KG7 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hps4Q99KG7 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.12■□□□□ 0.17
Hps4Q99KG7 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC16.12■□□□□ 0.17
Hps4Q99KG7 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC16.12■□□□□ 0.17
Hps4Q99KG7 Gm22331-201ENSMUST00000158066 136 ntBASIC16.12■□□□□ 0.17
Hps4Q99KG7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Hps4Q99KG7 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC16.12■□□□□ 0.17
Hps4Q99KG7 Gm6007-201ENSMUST00000208170 823 ntBASIC16.12■□□□□ 0.17
Hps4Q99KG7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hps4Q99KG7 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hps4Q99KG7 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hps4Q99KG7 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hps4Q99KG7 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC16.12■□□□□ 0.17
Hps4Q99KG7 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hps4Q99KG7 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Hps4Q99KG7 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hps4Q99KG7 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hps4Q99KG7 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hps4Q99KG7 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Hps4Q99KG7 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hps4Q99KG7 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hps4Q99KG7 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hps4Q99KG7 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Hps4Q99KG7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hps4Q99KG7 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hps4Q99KG7 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hps4Q99KG7 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hps4Q99KG7 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hps4Q99KG7 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Hps4Q99KG7 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hps4Q99KG7 Trav4d-2-201ENSMUST00000120914 335 ntBASIC16.11■□□□□ 0.17
Hps4Q99KG7 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC16.11■□□□□ 0.17
Hps4Q99KG7 Gm8062-201ENSMUST00000139696 444 ntBASIC16.11■□□□□ 0.17
Hps4Q99KG7 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hps4Q99KG7 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hps4Q99KG7 Gm37424-201ENSMUST00000191727 561 ntBASIC16.11■□□□□ 0.17
Hps4Q99KG7 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hps4Q99KG7 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hps4Q99KG7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hps4Q99KG7 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Hps4Q99KG7 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hps4Q99KG7 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hps4Q99KG7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hps4Q99KG7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Hps4Q99KG7 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hps4Q99KG7 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hps4Q99KG7 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hps4Q99KG7 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hps4Q99KG7 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hps4Q99KG7 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hps4Q99KG7 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hps4Q99KG7 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hps4Q99KG7 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hps4Q99KG7 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hps4Q99KG7 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hps4Q99KG7 Gm13392-201ENSMUST00000117708 150 ntBASIC16.1■□□□□ 0.17
Hps4Q99KG7 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.1■□□□□ 0.17
Hps4Q99KG7 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.1■□□□□ 0.17
Hps4Q99KG7 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.1■□□□□ 0.17
Hps4Q99KG7 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.1■□□□□ 0.17
Hps4Q99KG7 Gm12403-201ENSMUST00000121384 959 ntBASIC16.1■□□□□ 0.17
Hps4Q99KG7 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC16.1■□□□□ 0.17
Hps4Q99KG7 Gm8810-201ENSMUST00000172895 754 ntBASIC16.1■□□□□ 0.17
Hps4Q99KG7 Proscos-202ENSMUST00000178990 666 ntBASIC16.1■□□□□ 0.17
Hps4Q99KG7 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.1■□□□□ 0.17
Hps4Q99KG7 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.1■□□□□ 0.17
Hps4Q99KG7 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.1■□□□□ 0.17
Hps4Q99KG7 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.1■□□□□ 0.17
Hps4Q99KG7 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC16.1■□□□□ 0.17
Hps4Q99KG7 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms