Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk9Q99J95 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Cdk9Q99J95 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk9Q99J95 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk9Q99J95 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.89□□□□□ -0.19
Cdk9Q99J95 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Cdk9Q99J95 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.89□□□□□ -0.19
Cdk9Q99J95 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.89□□□□□ -0.19
Cdk9Q99J95 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk9Q99J95 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk9Q99J95 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk9Q99J95 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.89□□□□□ -0.19
Cdk9Q99J95 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk9Q99J95 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cdk9Q99J95 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk9Q99J95 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk9Q99J95 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cdk9Q99J95 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.89□□□□□ -0.19
Cdk9Q99J95 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk9Q99J95 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk9Q99J95 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.88□□□□□ -0.19
Cdk9Q99J95 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk9Q99J95 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.88□□□□□ -0.19
Cdk9Q99J95 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdk9Q99J95 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cdk9Q99J95 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.87□□□□□ -0.19
Cdk9Q99J95 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.87□□□□□ -0.19
Cdk9Q99J95 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.87□□□□□ -0.19
Cdk9Q99J95 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.87□□□□□ -0.19
Cdk9Q99J95 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.87□□□□□ -0.19
Cdk9Q99J95 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.87□□□□□ -0.19
Cdk9Q99J95 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk9Q99J95 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.87□□□□□ -0.19
Cdk9Q99J95 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cdk9Q99J95 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cdk9Q99J95 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.86□□□□□ -0.19
Cdk9Q99J95 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk9Q99J95 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk9Q99J95 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk9Q99J95 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Cdk9Q99J95 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk9Q99J95 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk9Q99J95 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Cdk9Q99J95 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk9Q99J95 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk9Q99J95 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk9Q99J95 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Cdk9Q99J95 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms