Protein–RNA interactions for Protein: Q91Y04

Pcdhb15, Protocadherin beta 15, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb15Q91Y04 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Gm25925-201ENSMUST00000158314 306 ntBASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb15Q91Y04 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb15Q91Y04 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb15Q91Y04 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb15Q91Y04 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb15Q91Y04 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.46■□□□□ 0.06
Pcdhb15Q91Y04 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb15Q91Y04 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb15Q91Y04 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Gm18041-201ENSMUST00000218210 618 ntBASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb15Q91Y04 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb15Q91Y04 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb15Q91Y04 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb15Q91Y04 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb15Q91Y04 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb15Q91Y04 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb15Q91Y04 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb15Q91Y04 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb15Q91Y04 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb15Q91Y04 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb15Q91Y04 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb15Q91Y04 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb15Q91Y04 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.44■□□□□ 0.06
Pcdhb15Q91Y04 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.44■□□□□ 0.06
Pcdhb15Q91Y04 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.44■□□□□ 0.06
Pcdhb15Q91Y04 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb15Q91Y04 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb15Q91Y04 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhb15Q91Y04 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb15Q91Y04 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb15Q91Y04 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhb15Q91Y04 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb15Q91Y04 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb15Q91Y04 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms