Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Paupar-201ENSMUST00000194826 3482 ntBASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Gm5177-201ENSMUST00000183092 997 ntBASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Gm27301-201ENSMUST00000184012 127 ntBASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb3Q91XZ7 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhb3Q91XZ7 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhb3Q91XZ7 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhb3Q91XZ7 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.83□□□□□ -0.19
Pcdhb3Q91XZ7 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhb3Q91XZ7 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.83□□□□□ -0.19
Pcdhb3Q91XZ7 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhb3Q91XZ7 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhb3Q91XZ7 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.83□□□□□ -0.19
Pcdhb3Q91XZ7 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb3Q91XZ7 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb3Q91XZ7 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb3Q91XZ7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb3Q91XZ7 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb3Q91XZ7 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.83□□□□□ -0.2
Pcdhb3Q91XZ7 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC13.83□□□□□ -0.2
Pcdhb3Q91XZ7 Gm11025-201ENSMUST00000140773 466 ntBASIC13.83□□□□□ -0.2
Pcdhb3Q91XZ7 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb3Q91XZ7 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.83□□□□□ -0.2
Pcdhb3Q91XZ7 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb3Q91XZ7 Gm2272-201ENSMUST00000194903 582 ntBASIC13.83□□□□□ -0.2
Pcdhb3Q91XZ7 AC125539.1-201ENSMUST00000227423 622 ntBASIC13.83□□□□□ -0.2
Pcdhb3Q91XZ7 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb3Q91XZ7 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb3Q91XZ7 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb3Q91XZ7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb3Q91XZ7 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhb3Q91XZ7 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb3Q91XZ7 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb3Q91XZ7 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhb3Q91XZ7 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Gm15427-201ENSMUST00000117288 531 ntBASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Gm45747-201ENSMUST00000212203 999 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms