Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm12209-201ENSMUST00000120089 596 ntBASIC15.72■□□□□ 0.11
Trex1Q91XB0 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trex1Q91XB0 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.72■□□□□ 0.11
Trex1Q91XB0 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.72■□□□□ 0.11
Trex1Q91XB0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trex1Q91XB0 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trex1Q91XB0 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trex1Q91XB0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trex1Q91XB0 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trex1Q91XB0 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trex1Q91XB0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trex1Q91XB0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trex1Q91XB0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trex1Q91XB0 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trex1Q91XB0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trex1Q91XB0 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
Trex1Q91XB0 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trex1Q91XB0 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trex1Q91XB0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trex1Q91XB0 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trex1Q91XB0 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trex1Q91XB0 Gm5187-201ENSMUST00000117317 991 ntBASIC15.71■□□□□ 0.11
Trex1Q91XB0 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trex1Q91XB0 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.71■□□□□ 0.11
Trex1Q91XB0 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trex1Q91XB0 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trex1Q91XB0 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
Trex1Q91XB0 Gm27514-201ENSMUST00000183692 110 ntBASIC15.71■□□□□ 0.11
Trex1Q91XB0 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.71■□□□□ 0.11
Trex1Q91XB0 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.71■□□□□ 0.11
Trex1Q91XB0 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trex1Q91XB0 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trex1Q91XB0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trex1Q91XB0 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trex1Q91XB0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.71■□□□□ 0.11
Trex1Q91XB0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trex1Q91XB0 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trex1Q91XB0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.71■□□□□ 0.1
Trex1Q91XB0 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.71■□□□□ 0.1
Trex1Q91XB0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trex1Q91XB0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trex1Q91XB0 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.7■□□□□ 0.1
Trex1Q91XB0 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.7■□□□□ 0.1
Trex1Q91XB0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.7■□□□□ 0.1
Trex1Q91XB0 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.7■□□□□ 0.1
Trex1Q91XB0 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.7■□□□□ 0.1
Trex1Q91XB0 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trex1Q91XB0 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Gm27572-201ENSMUST00000183702 255 ntBASIC15.7■□□□□ 0.1
Trex1Q91XB0 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Gm5370-201ENSMUST00000187187 574 ntBASIC15.7■□□□□ 0.1
Trex1Q91XB0 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.7■□□□□ 0.1
Trex1Q91XB0 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Gm8399-201ENSMUST00000082300 1117 ntBASIC15.7■□□□□ 0.1
Trex1Q91XB0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trex1Q91XB0 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trex1Q91XB0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trex1Q91XB0 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.69■□□□□ 0.1
Trex1Q91XB0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.69■□□□□ 0.1
Trex1Q91XB0 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.69■□□□□ 0.1
Trex1Q91XB0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trex1Q91XB0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trex1Q91XB0 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trex1Q91XB0 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.69■□□□□ 0.1
Trex1Q91XB0 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.69■□□□□ 0.1
Trex1Q91XB0 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.69■□□□□ 0.1
Trex1Q91XB0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.69■□□□□ 0.1
Trex1Q91XB0 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trex1Q91XB0 Gm44974-201ENSMUST00000206387 1279 ntBASIC15.69■□□□□ 0.1
Trex1Q91XB0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trex1Q91XB0 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms