Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp3Q91W36 Gm12490-201ENSMUST00000120255 560 ntBASIC14.17□□□□□ -0.14
Usp3Q91W36 Gm15376-201ENSMUST00000122258 783 ntBASIC14.17□□□□□ -0.14
Usp3Q91W36 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp3Q91W36 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp3Q91W36 Gm19080-201ENSMUST00000196082 550 ntBASIC14.17□□□□□ -0.14
Usp3Q91W36 Gm6745-201ENSMUST00000199216 526 ntBASIC14.17□□□□□ -0.14
Usp3Q91W36 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp3Q91W36 Gm9908-201ENSMUST00000211534 448 ntBASIC14.17□□□□□ -0.14
Usp3Q91W36 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp3Q91W36 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Usp3Q91W36 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.17□□□□□ -0.14
Usp3Q91W36 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp3Q91W36 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.17□□□□□ -0.14
Usp3Q91W36 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.17□□□□□ -0.14
Usp3Q91W36 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Usp3Q91W36 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp3Q91W36 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Usp3Q91W36 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp3Q91W36 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp3Q91W36 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Usp3Q91W36 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp3Q91W36 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp3Q91W36 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp3Q91W36 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp3Q91W36 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp3Q91W36 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp3Q91W36 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.16□□□□□ -0.14
Usp3Q91W36 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Usp3Q91W36 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp3Q91W36 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Usp3Q91W36 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp3Q91W36 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp3Q91W36 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp3Q91W36 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp3Q91W36 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.16□□□□□ -0.14
Usp3Q91W36 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Usp3Q91W36 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.16□□□□□ -0.14
Usp3Q91W36 Gm36943-201ENSMUST00000194422 282 ntBASIC14.16□□□□□ -0.14
Usp3Q91W36 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.16□□□□□ -0.14
Usp3Q91W36 Gm44719-201ENSMUST00000206404 149 ntBASIC14.16□□□□□ -0.14
Usp3Q91W36 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp3Q91W36 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Usp3Q91W36 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp3Q91W36 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp3Q91W36 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp3Q91W36 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp3Q91W36 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp3Q91W36 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp3Q91W36 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Usp3Q91W36 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp3Q91W36 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp3Q91W36 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp3Q91W36 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp3Q91W36 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp3Q91W36 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp3Q91W36 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp3Q91W36 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp3Q91W36 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Usp3Q91W36 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.15□□□□□ -0.14
Usp3Q91W36 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Usp3Q91W36 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Usp3Q91W36 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Usp3Q91W36 Gm15678-201ENSMUST00000117573 960 ntBASIC14.15□□□□□ -0.14
Usp3Q91W36 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 Gm12091-201ENSMUST00000146791 830 ntBASIC14.15□□□□□ -0.14
Usp3Q91W36 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 Gm18307-201ENSMUST00000206864 949 ntBASIC14.15□□□□□ -0.14
Usp3Q91W36 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.15□□□□□ -0.14
Usp3Q91W36 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.15□□□□□ -0.14
Usp3Q91W36 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.15□□□□□ -0.14
Usp3Q91W36 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Usp3Q91W36 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Usp3Q91W36 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Usp3Q91W36 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp3Q91W36 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Usp3Q91W36 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms