Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Gm5779-201ENSMUST00000218467 910 ntBASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lsm1Q8VC85 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Mir698-201ENSMUST00000102164 109 ntBASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Gm14822-201ENSMUST00000122247 291 ntBASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Lsm1Q8VC85 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Gm15693-201ENSMUST00000120470 637 ntBASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Gm24513-201ENSMUST00000174964 138 ntBASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Gm27397-201ENSMUST00000184997 107 ntBASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Gm33320-201ENSMUST00000192232 530 ntBASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Chchd1-203ENSMUST00000224633 557 ntBASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lsm1Q8VC85 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm1Q8VC85 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm1Q8VC85 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.3
Lsm1Q8VC85 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm1Q8VC85 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Lsm1Q8VC85 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm1Q8VC85 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm1Q8VC85 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Lsm1Q8VC85 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lsm1Q8VC85 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lsm1Q8VC85 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms