Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacnb1Q8R3Z5 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Cacnb1Q8R3Z5 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacnb1Q8R3Z5 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacnb1Q8R3Z5 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacnb1Q8R3Z5 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacnb1Q8R3Z5 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cacnb1Q8R3Z5 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Gm3563-201ENSMUST00000172963 1628 ntBASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Gm11543-201ENSMUST00000120758 370 ntBASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Bcas1os2-201ENSMUST00000131931 1174 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Gm28064-201ENSMUST00000185639 858 ntBASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Gm5268-201ENSMUST00000189212 940 ntBASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Gm2756-201ENSMUST00000195851 400 ntBASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Gm19211-201ENSMUST00000200251 1206 ntBASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Gm45098-201ENSMUST00000207179 657 ntBASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Olfr749-202ENSMUST00000214290 1330 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacnb1Q8R3Z5 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Gm12788-201ENSMUST00000119090 308 ntBASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Gm43396-201ENSMUST00000197506 706 ntBASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 RMST_1.1-211ENSMUST00000219726 783 ntTSL 3 BASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 mt-Td-201ENSMUST00000082404 70 ntBASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Gm7869-201ENSMUST00000121457 1322 ntBASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cacnb1Q8R3Z5 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cacnb1Q8R3Z5 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.08■□□□□ 0.17
Cacnb1Q8R3Z5 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cacnb1Q8R3Z5 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Cacnb1Q8R3Z5 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Cacnb1Q8R3Z5 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cacnb1Q8R3Z5 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.08■□□□□ 0.16
Cacnb1Q8R3Z5 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cacnb1Q8R3Z5 Gm14335-201ENSMUST00000119165 810 ntBASIC16.08■□□□□ 0.16
Cacnb1Q8R3Z5 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cacnb1Q8R3Z5 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.08■□□□□ 0.16
Cacnb1Q8R3Z5 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC16.08■□□□□ 0.16
Cacnb1Q8R3Z5 Gm3371-202ENSMUST00000177827 489 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Cacnb1Q8R3Z5 Gm20574-201ENSMUST00000182867 917 ntBASIC16.08■□□□□ 0.16
Cacnb1Q8R3Z5 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC16.08■□□□□ 0.16
Cacnb1Q8R3Z5 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC16.08■□□□□ 0.16
Cacnb1Q8R3Z5 Gm29011-201ENSMUST00000191059 712 ntBASIC16.08■□□□□ 0.16
Cacnb1Q8R3Z5 Gm37230-201ENSMUST00000194491 818 ntBASIC16.08■□□□□ 0.16
Cacnb1Q8R3Z5 Gm42591-201ENSMUST00000197249 700 ntBASIC16.08■□□□□ 0.16
Cacnb1Q8R3Z5 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC16.08■□□□□ 0.16
Cacnb1Q8R3Z5 Gm43036-201ENSMUST00000200594 373 ntBASIC16.08■□□□□ 0.16
Cacnb1Q8R3Z5 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.08■□□□□ 0.16
Cacnb1Q8R3Z5 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC16.08■□□□□ 0.16
Cacnb1Q8R3Z5 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms