Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp7Q8R1T1 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp7Q8R1T1 Gm9755-201ENSMUST00000032981 1356 ntBASIC17.54■□□□□ 0.4
Chmp7Q8R1T1 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp7Q8R1T1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp7Q8R1T1 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp7Q8R1T1 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp7Q8R1T1 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp7Q8R1T1 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp7Q8R1T1 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp7Q8R1T1 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC17.54■□□□□ 0.4
Chmp7Q8R1T1 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp7Q8R1T1 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC17.54■□□□□ 0.4
Chmp7Q8R1T1 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp7Q8R1T1 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Chmp7Q8R1T1 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.54■□□□□ 0.4
Chmp7Q8R1T1 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp7Q8R1T1 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC17.54■□□□□ 0.4
Chmp7Q8R1T1 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp7Q8R1T1 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp7Q8R1T1 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Gm12846-201ENSMUST00000120431 1373 ntBASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Mir1247-201ENSMUST00000116706 82 ntBASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Gm12537-201ENSMUST00000119266 1002 ntBASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Gm12070-201ENSMUST00000119551 1002 ntBASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Gm12671-201ENSMUST00000119978 1002 ntBASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Gm13292-201ENSMUST00000120014 1000 ntBASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Gm12403-201ENSMUST00000121384 959 ntBASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Gm10359-201ENSMUST00000180167 1002 ntBASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Gm12033-201ENSMUST00000180654 1002 ntBASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Gm5559-201ENSMUST00000180755 1002 ntBASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Gm4335-201ENSMUST00000182581 1004 ntBASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Olfr582-201ENSMUST00000098212 960 ntBASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp7Q8R1T1 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Gm20632-201ENSMUST00000176760 2427 ntBASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC17.52■□□□□ 0.4
Chmp7Q8R1T1 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms