Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vopp1Q8R1C3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vopp1Q8R1C3 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vopp1Q8R1C3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vopp1Q8R1C3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Vopp1Q8R1C3 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vopp1Q8R1C3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vopp1Q8R1C3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vopp1Q8R1C3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vopp1Q8R1C3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Vopp1Q8R1C3 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vopp1Q8R1C3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vopp1Q8R1C3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vopp1Q8R1C3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vopp1Q8R1C3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vopp1Q8R1C3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vopp1Q8R1C3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vopp1Q8R1C3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vopp1Q8R1C3 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.4□□□□□ -0.1
Vopp1Q8R1C3 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.4□□□□□ -0.1
Vopp1Q8R1C3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vopp1Q8R1C3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.4□□□□□ -0.1
Vopp1Q8R1C3 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vopp1Q8R1C3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vopp1Q8R1C3 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Vopp1Q8R1C3 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vopp1Q8R1C3 Gm12363-201ENSMUST00000122250 668 ntBASIC14.4□□□□□ -0.1
Vopp1Q8R1C3 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vopp1Q8R1C3 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vopp1Q8R1C3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.4□□□□□ -0.1
Vopp1Q8R1C3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.4□□□□□ -0.1
Vopp1Q8R1C3 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vopp1Q8R1C3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vopp1Q8R1C3 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vopp1Q8R1C3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vopp1Q8R1C3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vopp1Q8R1C3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vopp1Q8R1C3 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vopp1Q8R1C3 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vopp1Q8R1C3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Vopp1Q8R1C3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Gm43133-201ENSMUST00000197472 463 ntBASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Vopp1Q8R1C3 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Gm11793-201ENSMUST00000120433 981 ntBASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Gm16479-201ENSMUST00000121706 932 ntBASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vopp1Q8R1C3 Gm6013-201ENSMUST00000212264 699 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms