Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sf3a1Q8K4Z5 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sf3a1Q8K4Z5 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Sf3a1Q8K4Z5 Syt7-205ENSMUST00000224135 1557 ntBASIC16.86■□□□□ 0.29
Sf3a1Q8K4Z5 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sf3a1Q8K4Z5 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sf3a1Q8K4Z5 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sf3a1Q8K4Z5 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sf3a1Q8K4Z5 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Sf3a1Q8K4Z5 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC16.86■□□□□ 0.29
Sf3a1Q8K4Z5 Gm28760-201ENSMUST00000185995 736 ntBASIC16.86■□□□□ 0.29
Sf3a1Q8K4Z5 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sf3a1Q8K4Z5 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.86■□□□□ 0.29
Sf3a1Q8K4Z5 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.86■□□□□ 0.29
Sf3a1Q8K4Z5 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Sf3a1Q8K4Z5 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.86■□□□□ 0.29
Sf3a1Q8K4Z5 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.86■□□□□ 0.29
Sf3a1Q8K4Z5 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sf3a1Q8K4Z5 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sf3a1Q8K4Z5 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sf3a1Q8K4Z5 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sf3a1Q8K4Z5 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Sf3a1Q8K4Z5 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sf3a1Q8K4Z5 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Sf3a1Q8K4Z5 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sf3a1Q8K4Z5 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sf3a1Q8K4Z5 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sf3a1Q8K4Z5 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sf3a1Q8K4Z5 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Sf3a1Q8K4Z5 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sf3a1Q8K4Z5 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.85■□□□□ 0.29
Sf3a1Q8K4Z5 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sf3a1Q8K4Z5 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.85■□□□□ 0.29
Sf3a1Q8K4Z5 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sf3a1Q8K4Z5 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sf3a1Q8K4Z5 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sf3a1Q8K4Z5 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sf3a1Q8K4Z5 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.85■□□□□ 0.29
Sf3a1Q8K4Z5 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sf3a1Q8K4Z5 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Sf3a1Q8K4Z5 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sf3a1Q8K4Z5 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.85■□□□□ 0.29
Sf3a1Q8K4Z5 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.85■□□□□ 0.29
Sf3a1Q8K4Z5 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sf3a1Q8K4Z5 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Sf3a1Q8K4Z5 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sf3a1Q8K4Z5 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sf3a1Q8K4Z5 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.85■□□□□ 0.29
Sf3a1Q8K4Z5 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.85■□□□□ 0.29
Sf3a1Q8K4Z5 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sf3a1Q8K4Z5 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Sf3a1Q8K4Z5 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Gm7488-201ENSMUST00000117148 684 ntBASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Gm5866-201ENSMUST00000177881 973 ntBASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sf3a1Q8K4Z5 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sf3a1Q8K4Z5 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sf3a1Q8K4Z5 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.83■□□□□ 0.29
Sf3a1Q8K4Z5 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sf3a1Q8K4Z5 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms