Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf4Q8K4J2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Gm28033-201ENSMUST00000184224 96 ntBASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.54□□□□□ -0.4
Ebf4Q8K4J2 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Gm16198-201ENSMUST00000118766 670 ntBASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Gm17971-201ENSMUST00000190239 806 ntBASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ebf4Q8K4J2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Ebf4Q8K4J2 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ebf4Q8K4J2 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ebf4Q8K4J2 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Ebf4Q8K4J2 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ebf4Q8K4J2 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ebf4Q8K4J2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ebf4Q8K4J2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ebf4Q8K4J2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ebf4Q8K4J2 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf4Q8K4J2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
Ebf4Q8K4J2 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf4Q8K4J2 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf4Q8K4J2 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf4Q8K4J2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf4Q8K4J2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.52□□□□□ -0.41
Ebf4Q8K4J2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.52□□□□□ -0.41
Ebf4Q8K4J2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.52□□□□□ -0.41
Ebf4Q8K4J2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf4Q8K4J2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Ebf4Q8K4J2 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf4Q8K4J2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf4Q8K4J2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf4Q8K4J2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf4Q8K4J2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf4Q8K4J2 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf4Q8K4J2 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf4Q8K4J2 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms