Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Gm28450-201ENSMUST00000187349 638 ntBASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Gm10109-202ENSMUST00000206890 1211 ntBASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Gm45118-201ENSMUST00000208928 825 ntBASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Gm38049-201ENSMUST00000195698 1372 ntBASIC16.51■□□□□ 0.23
Col23a1Q8K4G2 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Gm5884-201ENSMUST00000036712 1479 ntBASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Gm37835-201ENSMUST00000193305 361 ntBASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 n-R5s77-201ENSMUST00000083757 119 ntBASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col23a1Q8K4G2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Gm15897-201ENSMUST00000117770 1486 ntBASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Gm23200-201ENSMUST00000104379 132 ntBASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Gm25214-201ENSMUST00000104573 129 ntBASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Gm11628-201ENSMUST00000117568 171 ntBASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col23a1Q8K4G2 AC167669.2-201ENSMUST00000224417 1620 ntBASIC16.48■□□□□ 0.23
Col23a1Q8K4G2 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col23a1Q8K4G2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col23a1Q8K4G2 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col23a1Q8K4G2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col23a1Q8K4G2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col23a1Q8K4G2 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col23a1Q8K4G2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col23a1Q8K4G2 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.48■□□□□ 0.23
Col23a1Q8K4G2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col23a1Q8K4G2 Gm12502-201ENSMUST00000120197 444 ntBASIC16.48■□□□□ 0.23
Col23a1Q8K4G2 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col23a1Q8K4G2 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col23a1Q8K4G2 Gm7467-201ENSMUST00000185173 652 ntBASIC16.48■□□□□ 0.23
Col23a1Q8K4G2 Gm5950-201ENSMUST00000213337 772 ntBASIC16.48■□□□□ 0.23
Col23a1Q8K4G2 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col23a1Q8K4G2 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Col23a1Q8K4G2 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col23a1Q8K4G2 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col23a1Q8K4G2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col23a1Q8K4G2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col23a1Q8K4G2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col23a1Q8K4G2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col23a1Q8K4G2 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms