Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.01□□□□□ -0.33
Clrn1Q8K445 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.01□□□□□ -0.33
Clrn1Q8K445 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.01□□□□□ -0.33
Clrn1Q8K445 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn1Q8K445 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Clrn1Q8K445 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13□□□□□ -0.33
Clrn1Q8K445 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Clrn1Q8K445 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Clrn1Q8K445 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13□□□□□ -0.33
Clrn1Q8K445 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13□□□□□ -0.33
Clrn1Q8K445 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Clrn1Q8K445 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Clrn1Q8K445 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Mir8102-201ENSMUST00000184148 139 ntBASIC13□□□□□ -0.33
Clrn1Q8K445 Mir7023-201ENSMUST00000185093 64 ntBASIC13□□□□□ -0.33
Clrn1Q8K445 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Clrn1Q8K445 Gm10766-202ENSMUST00000194123 606 ntBASIC13□□□□□ -0.33
Clrn1Q8K445 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13□□□□□ -0.33
Clrn1Q8K445 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13□□□□□ -0.33
Clrn1Q8K445 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13□□□□□ -0.33
Clrn1Q8K445 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13□□□□□ -0.33
Clrn1Q8K445 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13□□□□□ -0.33
Clrn1Q8K445 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Clrn1Q8K445 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13□□□□□ -0.33
Clrn1Q8K445 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clrn1Q8K445 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.99□□□□□ -0.33
Clrn1Q8K445 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn1Q8K445 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Clrn1Q8K445 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms