Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rtn1Q8K0T0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rtn1Q8K0T0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rtn1Q8K0T0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rtn1Q8K0T0 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.91■□□□□ 0.14
Rtn1Q8K0T0 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Gm44855-201ENSMUST00000205725 362 ntBASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Gm44719-201ENSMUST00000206404 149 ntBASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 AC132260.2-201ENSMUST00000224482 344 ntBASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rtn1Q8K0T0 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtn1Q8K0T0 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 Gm28760-201ENSMUST00000185995 736 ntBASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 Gm42612-201ENSMUST00000197986 623 ntBASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 Gm43170-201ENSMUST00000199827 612 ntBASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 Gm7730-201ENSMUST00000212486 454 ntBASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 Gm6218-201ENSMUST00000219812 628 ntBASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rtn1Q8K0T0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Rtn1Q8K0T0 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Rtn1Q8K0T0 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rtn1Q8K0T0 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtn1Q8K0T0 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtn1Q8K0T0 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtn1Q8K0T0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtn1Q8K0T0 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms