Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Trpm6Q8CIR4 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trpm6Q8CIR4 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trpm6Q8CIR4 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.2
Trpm6Q8CIR4 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trpm6Q8CIR4 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trpm6Q8CIR4 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trpm6Q8CIR4 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trpm6Q8CIR4 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trpm6Q8CIR4 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.77□□□□□ -0.21
Trpm6Q8CIR4 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.77□□□□□ -0.21
Trpm6Q8CIR4 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.77□□□□□ -0.21
Trpm6Q8CIR4 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.77□□□□□ -0.21
Trpm6Q8CIR4 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trpm6Q8CIR4 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.77□□□□□ -0.21
Trpm6Q8CIR4 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trpm6Q8CIR4 Gm29705-201ENSMUST00000212598 474 ntBASIC13.77□□□□□ -0.21
Trpm6Q8CIR4 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trpm6Q8CIR4 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trpm6Q8CIR4 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.77□□□□□ -0.21
Trpm6Q8CIR4 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trpm6Q8CIR4 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Trpm6Q8CIR4 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trpm6Q8CIR4 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Gm12384-201ENSMUST00000119228 919 ntBASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Gm38144-201ENSMUST00000192790 465 ntBASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Itm2b-204ENSMUST00000228637 783 ntBASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Gm5370-201ENSMUST00000187187 574 ntBASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Gm19184-201ENSMUST00000196798 928 ntBASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Gm43118-201ENSMUST00000199149 775 ntBASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Gm26315-201ENSMUST00000083890 321 ntBASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trpm6Q8CIR4 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trpm6Q8CIR4 Gm14350-201ENSMUST00000116642 640 ntBASIC13.74□□□□□ -0.21
Trpm6Q8CIR4 Gm5187-201ENSMUST00000117317 991 ntBASIC13.74□□□□□ -0.21
Trpm6Q8CIR4 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.74□□□□□ -0.21
Trpm6Q8CIR4 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.74□□□□□ -0.21
Trpm6Q8CIR4 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.74□□□□□ -0.21
Trpm6Q8CIR4 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trpm6Q8CIR4 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Trpm6Q8CIR4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.74□□□□□ -0.21
Trpm6Q8CIR4 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.74□□□□□ -0.21
Trpm6Q8CIR4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trpm6Q8CIR4 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trpm6Q8CIR4 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trpm6Q8CIR4 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.74□□□□□ -0.21
Trpm6Q8CIR4 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trpm6Q8CIR4 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms