Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rdh1Q8CGV4 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rdh1Q8CGV4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Gm27839-201ENSMUST00000184242 106 ntBASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rdh1Q8CGV4 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Gm4984-201ENSMUST00000115987 360 ntBASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Gm17150-201ENSMUST00000165577 381 ntBASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Gm24447-201ENSMUST00000083977 338 ntBASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rdh1Q8CGV4 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Rdh1Q8CGV4 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rdh1Q8CGV4 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rdh1Q8CGV4 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.33□□□□□ -0.28
Rdh1Q8CGV4 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rdh1Q8CGV4 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.33□□□□□ -0.28
Rdh1Q8CGV4 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rdh1Q8CGV4 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.33□□□□□ -0.28
Rdh1Q8CGV4 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rdh1Q8CGV4 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.33□□□□□ -0.28
Rdh1Q8CGV4 Gm44397-201ENSMUST00000195950 113 ntBASIC13.33□□□□□ -0.28
Rdh1Q8CGV4 Gm42550-201ENSMUST00000201553 960 ntBASIC13.33□□□□□ -0.28
Rdh1Q8CGV4 Gm17794-201ENSMUST00000220252 955 ntBASIC13.33□□□□□ -0.28
Rdh1Q8CGV4 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rdh1Q8CGV4 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rdh1Q8CGV4 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rdh1Q8CGV4 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rdh1Q8CGV4 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms