Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smc5Q8CG46 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smc5Q8CG46 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC17.04■□□□□ 0.32
Smc5Q8CG46 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc5Q8CG46 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc5Q8CG46 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smc5Q8CG46 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc5Q8CG46 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC17.04■□□□□ 0.32
Smc5Q8CG46 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smc5Q8CG46 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.04■□□□□ 0.32
Smc5Q8CG46 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc5Q8CG46 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Smc5Q8CG46 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc5Q8CG46 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc5Q8CG46 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Smc5Q8CG46 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc5Q8CG46 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smc5Q8CG46 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Gm33320-201ENSMUST00000192232 530 ntBASIC17.03■□□□□ 0.32
Smc5Q8CG46 Gm44335-201ENSMUST00000196879 141 ntBASIC17.03■□□□□ 0.32
Smc5Q8CG46 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Gm44297-201ENSMUST00000198304 141 ntBASIC17.03■□□□□ 0.32
Smc5Q8CG46 Gm44346-201ENSMUST00000198851 141 ntBASIC17.03■□□□□ 0.32
Smc5Q8CG46 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc5Q8CG46 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Smc5Q8CG46 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smc5Q8CG46 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smc5Q8CG46 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smc5Q8CG46 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smc5Q8CG46 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smc5Q8CG46 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smc5Q8CG46 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smc5Q8CG46 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smc5Q8CG46 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smc5Q8CG46 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smc5Q8CG46 Gm24543-201ENSMUST00000103867 82 ntBASIC17.02■□□□□ 0.32
Smc5Q8CG46 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smc5Q8CG46 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Smc5Q8CG46 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.02■□□□□ 0.32
Smc5Q8CG46 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smc5Q8CG46 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smc5Q8CG46 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smc5Q8CG46 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC17.02■□□□□ 0.32
Smc5Q8CG46 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smc5Q8CG46 Gm28630-201ENSMUST00000187806 498 ntBASIC17.02■□□□□ 0.32
Smc5Q8CG46 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Smc5Q8CG46 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.02■□□□□ 0.32
Smc5Q8CG46 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smc5Q8CG46 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smc5Q8CG46 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smc5Q8CG46 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Smc5Q8CG46 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC17.02■□□□□ 0.31
Smc5Q8CG46 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Smc5Q8CG46 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smc5Q8CG46 Gm37844-201ENSMUST00000192473 4097 ntBASIC17.02■□□□□ 0.31
Smc5Q8CG46 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smc5Q8CG46 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Smc5Q8CG46 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Smc5Q8CG46 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smc5Q8CG46 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC17.02■□□□□ 0.31
Smc5Q8CG46 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Ankra2-208ENSMUST00000226100 1476 ntBASIC17.01■□□□□ 0.31
Smc5Q8CG46 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms