Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vcpip1Q8CDG3 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vcpip1Q8CDG3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vcpip1Q8CDG3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Vcpip1Q8CDG3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vcpip1Q8CDG3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vcpip1Q8CDG3 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Vcpip1Q8CDG3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Vcpip1Q8CDG3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vcpip1Q8CDG3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Gm15693-201ENSMUST00000120470 637 ntBASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Gm10253-201ENSMUST00000194270 940 ntBASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Gm16476-201ENSMUST00000221544 139 ntBASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcpip1Q8CDG3 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Dupd1-202ENSMUST00000224735 548 ntBASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vcpip1Q8CDG3 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vcpip1Q8CDG3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms