Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Alx1Q8C8B0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Alx1Q8C8B0 Gm42550-201ENSMUST00000201553 960 ntBASIC16.02■□□□□ 0.16
Alx1Q8C8B0 Gm8463-201ENSMUST00000208573 613 ntBASIC16.02■□□□□ 0.16
Alx1Q8C8B0 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Alx1Q8C8B0 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Alx1Q8C8B0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Alx1Q8C8B0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Alx1Q8C8B0 Gm14752-201ENSMUST00000120719 2075 ntBASIC16.02■□□□□ 0.15
Alx1Q8C8B0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Alx1Q8C8B0 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Alx1Q8C8B0 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Alx1Q8C8B0 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Alx1Q8C8B0 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Alx1Q8C8B0 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Alx1Q8C8B0 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Alx1Q8C8B0 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Alx1Q8C8B0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Gm44397-201ENSMUST00000195950 113 ntBASIC16.01■□□□□ 0.15
Alx1Q8C8B0 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Alx1Q8C8B0 Gm2420-202ENSMUST00000202224 2249 ntBASIC16■□□□□ 0.15
Alx1Q8C8B0 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16■□□□□ 0.15
Alx1Q8C8B0 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16■□□□□ 0.15
Alx1Q8C8B0 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Alx1Q8C8B0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Alx1Q8C8B0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Alx1Q8C8B0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16■□□□□ 0.15
Alx1Q8C8B0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16■□□□□ 0.15
Alx1Q8C8B0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Alx1Q8C8B0 Il17rd-203ENSMUST00000225146 3366 ntBASIC16■□□□□ 0.15
Alx1Q8C8B0 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Alx1Q8C8B0 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16■□□□□ 0.15
Alx1Q8C8B0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Alx1Q8C8B0 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16■□□□□ 0.15
Alx1Q8C8B0 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC16■□□□□ 0.15
Alx1Q8C8B0 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16■□□□□ 0.15
Alx1Q8C8B0 Gm11918-201ENSMUST00000121660 179 ntBASIC16■□□□□ 0.15
Alx1Q8C8B0 AC073947.2-201ENSMUST00000215888 1130 ntBASIC16■□□□□ 0.15
Alx1Q8C8B0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16■□□□□ 0.15
Alx1Q8C8B0 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16■□□□□ 0.15
Alx1Q8C8B0 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16■□□□□ 0.15
Alx1Q8C8B0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Alx1Q8C8B0 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
Alx1Q8C8B0 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Alx1Q8C8B0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Alx1Q8C8B0 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16■□□□□ 0.15
Alx1Q8C8B0 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16■□□□□ 0.15
Alx1Q8C8B0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Alx1Q8C8B0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Alx1Q8C8B0 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Alx1Q8C8B0 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Alx1Q8C8B0 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Alx1Q8C8B0 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Alx1Q8C8B0 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Alx1Q8C8B0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Alx1Q8C8B0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Alx1Q8C8B0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Alx1Q8C8B0 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.99■□□□□ 0.15
Alx1Q8C8B0 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Alx1Q8C8B0 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.99■□□□□ 0.15
Alx1Q8C8B0 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.99■□□□□ 0.15
Alx1Q8C8B0 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Alx1Q8C8B0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Alx1Q8C8B0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Alx1Q8C8B0 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Alx1Q8C8B0 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.99■□□□□ 0.15
Alx1Q8C8B0 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Alx1Q8C8B0 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Alx1Q8C8B0 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Alx1Q8C8B0 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Alx1Q8C8B0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms