Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Uba3Q8C878 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Uba3Q8C878 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Uba3Q8C878 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Uba3Q8C878 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Uba3Q8C878 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Uba3Q8C878 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Uba3Q8C878 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Uba3Q8C878 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.51□□□□□ -0.09
Uba3Q8C878 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Uba3Q8C878 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Uba3Q8C878 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.51□□□□□ -0.09
Uba3Q8C878 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.51□□□□□ -0.09
Uba3Q8C878 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Uba3Q8C878 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Uba3Q8C878 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Uba3Q8C878 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Uba3Q8C878 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Uba3Q8C878 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Uba3Q8C878 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Uba3Q8C878 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Uba3Q8C878 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Uba3Q8C878 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Uba3Q8C878 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Uba3Q8C878 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Uba3Q8C878 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.51□□□□□ -0.09
Uba3Q8C878 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Uba3Q8C878 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Uba3Q8C878 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Uba3Q8C878 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Uba3Q8C878 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Uba3Q8C878 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Uba3Q8C878 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Uba3Q8C878 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Uba3Q8C878 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Uba3Q8C878 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.5□□□□□ -0.09
Uba3Q8C878 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.5□□□□□ -0.09
Uba3Q8C878 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.5□□□□□ -0.09
Uba3Q8C878 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Uba3Q8C878 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.5□□□□□ -0.09
Uba3Q8C878 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.5□□□□□ -0.09
Uba3Q8C878 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.5□□□□□ -0.09
Uba3Q8C878 Gm24420-201ENSMUST00000176676 59 ntBASIC14.5□□□□□ -0.09
Uba3Q8C878 Gm5866-201ENSMUST00000177881 973 ntBASIC14.5□□□□□ -0.09
Uba3Q8C878 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.5□□□□□ -0.09
Uba3Q8C878 Gm18905-201ENSMUST00000205454 928 ntBASIC14.5□□□□□ -0.09
Uba3Q8C878 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Uba3Q8C878 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Uba3Q8C878 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Uba3Q8C878 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Uba3Q8C878 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Uba3Q8C878 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.5□□□□□ -0.09
Uba3Q8C878 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Uba3Q8C878 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Uba3Q8C878 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Uba3Q8C878 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Uba3Q8C878 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Uba3Q8C878 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Uba3Q8C878 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Uba3Q8C878 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.5□□□□□ -0.09
Uba3Q8C878 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Uba3Q8C878 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Uba3Q8C878 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Uba3Q8C878 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Uba3Q8C878 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.49□□□□□ -0.09
Uba3Q8C878 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Uba3Q8C878 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Uba3Q8C878 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.49□□□□□ -0.09
Uba3Q8C878 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Uba3Q8C878 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Uba3Q8C878 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Uba3Q8C878 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Uba3Q8C878 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Uba3Q8C878 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Uba3Q8C878 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.49□□□□□ -0.09
Uba3Q8C878 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Uba3Q8C878 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.49□□□□□ -0.09
Uba3Q8C878 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.49□□□□□ -0.09
Uba3Q8C878 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Uba3Q8C878 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
Uba3Q8C878 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.49□□□□□ -0.09
Uba3Q8C878 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Uba3Q8C878 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.49□□□□□ -0.09
Uba3Q8C878 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Uba3Q8C878 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.49□□□□□ -0.09
Uba3Q8C878 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Uba3Q8C878 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Uba3Q8C878 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Uba3Q8C878 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.49□□□□□ -0.09
Uba3Q8C878 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Uba3Q8C878 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Uba3Q8C878 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Uba3Q8C878 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Uba3Q8C878 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Uba3Q8C878 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Uba3Q8C878 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Uba3Q8C878 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Uba3Q8C878 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Uba3Q8C878 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Uba3Q8C878 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms