Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.08□□□□□ -0.16
Nup54Q8BTS4 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Gm23984-201ENSMUST00000157139 203 ntBASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.08□□□□□ -0.16
Nup54Q8BTS4 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Gm8515-201ENSMUST00000194852 576 ntBASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Gm18307-201ENSMUST00000206864 949 ntBASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Gm12091-201ENSMUST00000146791 830 ntBASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Gm5161-201ENSMUST00000075243 853 ntBASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Gm24447-201ENSMUST00000083977 338 ntBASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nup54Q8BTS4 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Gm6745-201ENSMUST00000199216 526 ntBASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nup54Q8BTS4 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms