Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Usp54Q8BL06 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp54Q8BL06 Gm25890-201ENSMUST00000177643 165 ntBASIC19.21■□□□□ 0.67
Usp54Q8BL06 Rnu1b2-201ENSMUST00000178073 165 ntBASIC19.21■□□□□ 0.67
Usp54Q8BL06 Rnu1b1-201ENSMUST00000178250 165 ntBASIC19.21■□□□□ 0.67
Usp54Q8BL06 Gm22614-201ENSMUST00000178300 165 ntBASIC19.21■□□□□ 0.67
Usp54Q8BL06 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Usp54Q8BL06 CT030182.1-201ENSMUST00000225935 533 ntBASIC19.21■□□□□ 0.67
Usp54Q8BL06 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp54Q8BL06 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Usp54Q8BL06 Gm22042-201ENSMUST00000082989 165 ntBASIC19.21■□□□□ 0.67
Usp54Q8BL06 Gm26232-201ENSMUST00000083360 166 ntBASIC19.21■□□□□ 0.67
Usp54Q8BL06 Gm24136-201ENSMUST00000083374 165 ntBASIC19.21■□□□□ 0.67
Usp54Q8BL06 Rnu1b6-201ENSMUST00000083839 166 ntBASIC19.21■□□□□ 0.67
Usp54Q8BL06 Gm26110-201ENSMUST00000083971 165 ntBASIC19.21■□□□□ 0.67
Usp54Q8BL06 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp54Q8BL06 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp54Q8BL06 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC19.21■□□□□ 0.67
Usp54Q8BL06 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp54Q8BL06 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Usp54Q8BL06 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC19.21■□□□□ 0.67
Usp54Q8BL06 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp54Q8BL06 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp54Q8BL06 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Usp54Q8BL06 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Usp54Q8BL06 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC19.2■□□□□ 0.66
Usp54Q8BL06 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp54Q8BL06 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp54Q8BL06 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Usp54Q8BL06 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp54Q8BL06 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp54Q8BL06 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC19.2■□□□□ 0.66
Usp54Q8BL06 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC19.2■□□□□ 0.66
Usp54Q8BL06 Gm8176-201ENSMUST00000191297 1099 ntBASIC19.2■□□□□ 0.66
Usp54Q8BL06 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Usp54Q8BL06 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC19.2■□□□□ 0.66
Usp54Q8BL06 Gm6458-201ENSMUST00000211573 635 ntBASIC19.2■□□□□ 0.66
Usp54Q8BL06 AC166051.1-201ENSMUST00000214313 210 ntBASIC19.2■□□□□ 0.66
Usp54Q8BL06 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp54Q8BL06 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp54Q8BL06 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp54Q8BL06 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp54Q8BL06 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp54Q8BL06 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp54Q8BL06 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp54Q8BL06 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC19.2■□□□□ 0.66
Usp54Q8BL06 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Usp54Q8BL06 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp54Q8BL06 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp54Q8BL06 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp54Q8BL06 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp54Q8BL06 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp54Q8BL06 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC19.19■□□□□ 0.66
Usp54Q8BL06 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC19.19■□□□□ 0.66
Usp54Q8BL06 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp54Q8BL06 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp54Q8BL06 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC19.19■□□□□ 0.66
Usp54Q8BL06 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp54Q8BL06 Gm4819-201ENSMUST00000182170 1009 ntBASIC19.19■□□□□ 0.66
Usp54Q8BL06 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC19.19■□□□□ 0.66
Usp54Q8BL06 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp54Q8BL06 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp54Q8BL06 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp54Q8BL06 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC19.19■□□□□ 0.66
Usp54Q8BL06 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp54Q8BL06 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Usp54Q8BL06 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Usp54Q8BL06 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Usp54Q8BL06 Gm6015-201ENSMUST00000217493 1586 ntBASIC19.19■□□□□ 0.66
Usp54Q8BL06 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Usp54Q8BL06 Gm6161-201ENSMUST00000121942 1102 ntBASIC19.19■□□□□ 0.66
Usp54Q8BL06 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC19.19■□□□□ 0.66
Usp54Q8BL06 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Usp54Q8BL06 Gm6254-201ENSMUST00000168178 1072 ntBASIC19.19■□□□□ 0.66
Usp54Q8BL06 Gm6153-201ENSMUST00000172004 1058 ntBASIC19.19■□□□□ 0.66
Usp54Q8BL06 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Usp54Q8BL06 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Usp54Q8BL06 Gm5641-202ENSMUST00000198699 1080 ntBASIC19.19■□□□□ 0.66
Usp54Q8BL06 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp54Q8BL06 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp54Q8BL06 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp54Q8BL06 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp54Q8BL06 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp54Q8BL06 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp54Q8BL06 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp54Q8BL06 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp54Q8BL06 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.18■□□□□ 0.66
Usp54Q8BL06 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Usp54Q8BL06 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp54Q8BL06 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Usp54Q8BL06 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp54Q8BL06 Tmed9-203ENSMUST00000224741 1450 ntBASIC19.18■□□□□ 0.66
Usp54Q8BL06 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp54Q8BL06 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp54Q8BL06 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp54Q8BL06 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp54Q8BL06 Gm14704-201ENSMUST00000120300 874 ntBASIC19.18■□□□□ 0.66
Usp54Q8BL06 Gm12715-201ENSMUST00000121430 1128 ntBASIC19.18■□□□□ 0.66
Usp54Q8BL06 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp54Q8BL06 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms