Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Gm7774-201ENSMUST00000200064 533 ntBASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Gm8396-201ENSMUST00000057361 823 ntBASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc40Q8BI79 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc40Q8BI79 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Mir449b-201ENSMUST00000104833 80 ntBASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms