Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SynbQ8BI41 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
SynbQ8BI41 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.21□□□□□ -0.3
SynbQ8BI41 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SynbQ8BI41 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 BC001981-202ENSMUST00000191393 1545 ntBASIC13.2□□□□□ -0.3
SynbQ8BI41 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SynbQ8BI41 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.2□□□□□ -0.3
SynbQ8BI41 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.2□□□□□ -0.3
SynbQ8BI41 Mir7085-201ENSMUST00000184353 66 ntBASIC13.2□□□□□ -0.3
SynbQ8BI41 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
SynbQ8BI41 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.2□□□□□ -0.3
SynbQ8BI41 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.2□□□□□ -0.3
SynbQ8BI41 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SynbQ8BI41 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.2□□□□□ -0.3
SynbQ8BI41 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
SynbQ8BI41 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SynbQ8BI41 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SynbQ8BI41 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SynbQ8BI41 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SynbQ8BI41 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SynbQ8BI41 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SynbQ8BI41 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SynbQ8BI41 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SynbQ8BI41 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SynbQ8BI41 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
SynbQ8BI41 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SynbQ8BI41 Gm15393-201ENSMUST00000120499 219 ntBASIC13.19□□□□□ -0.3
SynbQ8BI41 Gm17150-201ENSMUST00000165577 381 ntBASIC13.19□□□□□ -0.3
SynbQ8BI41 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SynbQ8BI41 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.19□□□□□ -0.3
SynbQ8BI41 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SynbQ8BI41 Gm33320-201ENSMUST00000192232 530 ntBASIC13.19□□□□□ -0.3
SynbQ8BI41 Gm6266-201ENSMUST00000203844 806 ntBASIC13.19□□□□□ -0.3
SynbQ8BI41 Gm6916-202ENSMUST00000205523 195 ntBASIC13.19□□□□□ -0.3
SynbQ8BI41 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.19□□□□□ -0.3
SynbQ8BI41 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
SynbQ8BI41 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
SynbQ8BI41 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SynbQ8BI41 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SynbQ8BI41 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SynbQ8BI41 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SynbQ8BI41 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SynbQ8BI41 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SynbQ8BI41 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.19□□□□□ -0.3
SynbQ8BI41 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SynbQ8BI41 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SynbQ8BI41 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SynbQ8BI41 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SynbQ8BI41 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SynbQ8BI41 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SynbQ8BI41 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SynbQ8BI41 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
SynbQ8BI41 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SynbQ8BI41 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
SynbQ8BI41 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.18□□□□□ -0.3
SynbQ8BI41 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SynbQ8BI41 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SynbQ8BI41 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SynbQ8BI41 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SynbQ8BI41 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.18□□□□□ -0.3
SynbQ8BI41 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SynbQ8BI41 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SynbQ8BI41 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SynbQ8BI41 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SynbQ8BI41 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.18□□□□□ -0.3
SynbQ8BI41 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SynbQ8BI41 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SynbQ8BI41 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SynbQ8BI41 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SynbQ8BI41 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.18□□□□□ -0.3
SynbQ8BI41 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SynbQ8BI41 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms