Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Mir3547-201ENSMUST00000175461 88 ntBASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Gm17795-201ENSMUST00000214505 757 ntBASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Gm2495-201ENSMUST00000191160 466 ntBASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.88■□□□□ 0.13
Prpf40bQ80W14 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Prpf40bQ80W14 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Olfr286-202ENSMUST00000205305 969 ntBASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Prpf40bQ80W14 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Prpf40bQ80W14 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms