Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp8Q80U87 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.85□□□□□ -0.19
Usp8Q80U87 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Usp8Q80U87 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.85□□□□□ -0.19
Usp8Q80U87 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Usp8Q80U87 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.85□□□□□ -0.19
Usp8Q80U87 Mir6990-201ENSMUST00000183724 91 ntBASIC13.85□□□□□ -0.19
Usp8Q80U87 Gm43125-201ENSMUST00000201724 730 ntBASIC13.85□□□□□ -0.19
Usp8Q80U87 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.85□□□□□ -0.19
Usp8Q80U87 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.85□□□□□ -0.19
Usp8Q80U87 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp8Q80U87 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp8Q80U87 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Usp8Q80U87 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp8Q80U87 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Usp8Q80U87 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Usp8Q80U87 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Usp8Q80U87 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp8Q80U87 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp8Q80U87 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp8Q80U87 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp8Q80U87 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Usp8Q80U87 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp8Q80U87 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp8Q80U87 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp8Q80U87 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp8Q80U87 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp8Q80U87 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp8Q80U87 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp8Q80U87 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp8Q80U87 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp8Q80U87 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp8Q80U87 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Usp8Q80U87 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp8Q80U87 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Usp8Q80U87 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp8Q80U87 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp8Q80U87 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Usp8Q80U87 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Usp8Q80U87 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.84□□□□□ -0.19
Usp8Q80U87 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Usp8Q80U87 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp8Q80U87 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Usp8Q80U87 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.84□□□□□ -0.19
Usp8Q80U87 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Usp8Q80U87 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp8Q80U87 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Usp8Q80U87 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp8Q80U87 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp8Q80U87 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp8Q80U87 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp8Q80U87 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp8Q80U87 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp8Q80U87 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp8Q80U87 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp8Q80U87 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Usp8Q80U87 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp8Q80U87 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Usp8Q80U87 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.83□□□□□ -0.19
Usp8Q80U87 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Usp8Q80U87 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Usp8Q80U87 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Usp8Q80U87 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.83□□□□□ -0.19
Usp8Q80U87 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Usp8Q80U87 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp8Q80U87 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp8Q80U87 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp8Q80U87 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp8Q80U87 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp8Q80U87 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp8Q80U87 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Usp8Q80U87 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
Usp8Q80U87 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Usp8Q80U87 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp8Q80U87 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.83□□□□□ -0.2
Usp8Q80U87 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.83□□□□□ -0.2
Usp8Q80U87 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.83□□□□□ -0.2
Usp8Q80U87 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.83□□□□□ -0.2
Usp8Q80U87 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.83□□□□□ -0.2
Usp8Q80U87 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Usp8Q80U87 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.83□□□□□ -0.2
Usp8Q80U87 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Usp8Q80U87 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Usp8Q80U87 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp8Q80U87 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp8Q80U87 BC001981-202ENSMUST00000191393 1545 ntBASIC13.83□□□□□ -0.2
Usp8Q80U87 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.83□□□□□ -0.2
Usp8Q80U87 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp8Q80U87 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp8Q80U87 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp8Q80U87 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.83□□□□□ -0.2
Usp8Q80U87 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp8Q80U87 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.83□□□□□ -0.2
Usp8Q80U87 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usp8Q80U87 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.82□□□□□ -0.2
Usp8Q80U87 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Usp8Q80U87 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp8Q80U87 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp8Q80U87 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp8Q80U87 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms