Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Ddx55Q6ZPL9 Gm11658-201ENSMUST00000120913 1008 ntBASIC15.59■□□□□ 0.09
Ddx55Q6ZPL9 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx55Q6ZPL9 Gm2467-201ENSMUST00000182266 1010 ntBASIC15.59■□□□□ 0.09
Ddx55Q6ZPL9 Gm6981-201ENSMUST00000182467 1008 ntBASIC15.59■□□□□ 0.09
Ddx55Q6ZPL9 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.59■□□□□ 0.09
Ddx55Q6ZPL9 Gm7118-201ENSMUST00000200167 1003 ntBASIC15.59■□□□□ 0.09
Ddx55Q6ZPL9 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx55Q6ZPL9 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx55Q6ZPL9 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ddx55Q6ZPL9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ddx55Q6ZPL9 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.59■□□□□ 0.09
Ddx55Q6ZPL9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx55Q6ZPL9 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.59■□□□□ 0.09
Ddx55Q6ZPL9 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.59■□□□□ 0.09
Ddx55Q6ZPL9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx55Q6ZPL9 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx55Q6ZPL9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx55Q6ZPL9 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Ddx55Q6ZPL9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ddx55Q6ZPL9 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ddx55Q6ZPL9 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.58■□□□□ 0.09
Ddx55Q6ZPL9 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.58■□□□□ 0.09
Ddx55Q6ZPL9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ddx55Q6ZPL9 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ddx55Q6ZPL9 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC15.58■□□□□ 0.09
Ddx55Q6ZPL9 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ddx55Q6ZPL9 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.09
Ddx55Q6ZPL9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx55Q6ZPL9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Gm24255-201ENSMUST00000104481 128 ntBASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Gm38000-201ENSMUST00000192390 1215 ntBASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Gm10608-202ENSMUST00000213924 676 ntBASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx55Q6ZPL9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.56■□□□□ 0.08
Ddx55Q6ZPL9 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms