Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ift88Q61371 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ift88Q61371 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ift88Q61371 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.24■□□□□ 0.03
Ift88Q61371 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ift88Q61371 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ift88Q61371 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ift88Q61371 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ift88Q61371 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ift88Q61371 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ift88Q61371 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ift88Q61371 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ift88Q61371 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ift88Q61371 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Ift88Q61371 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Ift88Q61371 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ift88Q61371 Gm5566-201ENSMUST00000116118 459 ntBASIC15.24■□□□□ 0.03
Ift88Q61371 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ift88Q61371 Gm25911-201ENSMUST00000157621 56 ntBASIC15.24■□□□□ 0.03
Ift88Q61371 Gm9719-201ENSMUST00000162765 543 ntBASIC15.24■□□□□ 0.03
Ift88Q61371 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ift88Q61371 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ift88Q61371 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ift88Q61371 Gm18766-201ENSMUST00000189811 808 ntBASIC15.24■□□□□ 0.03
Ift88Q61371 Gm5264-201ENSMUST00000190584 848 ntBASIC15.24■□□□□ 0.03
Ift88Q61371 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.24■□□□□ 0.03
Ift88Q61371 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.24■□□□□ 0.03
Ift88Q61371 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.24■□□□□ 0.03
Ift88Q61371 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ift88Q61371 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ift88Q61371 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ift88Q61371 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.24■□□□□ 0.03
Ift88Q61371 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ift88Q61371 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ift88Q61371 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ift88Q61371 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ift88Q61371 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ift88Q61371 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ift88Q61371 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Ift88Q61371 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ift88Q61371 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ift88Q61371 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ift88Q61371 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ift88Q61371 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ift88Q61371 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ift88Q61371 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ift88Q61371 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ift88Q61371 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ift88Q61371 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.23■□□□□ 0.03
Ift88Q61371 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.23■□□□□ 0.03
Ift88Q61371 Gm25287-201ENSMUST00000103846 110 ntBASIC15.23■□□□□ 0.03
Ift88Q61371 Gm22918-201ENSMUST00000103855 110 ntBASIC15.23■□□□□ 0.03
Ift88Q61371 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.23■□□□□ 0.03
Ift88Q61371 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.23■□□□□ 0.03
Ift88Q61371 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ift88Q61371 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ift88Q61371 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ift88Q61371 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ift88Q61371 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ift88Q61371 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ift88Q61371 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.23■□□□□ 0.03
Ift88Q61371 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ift88Q61371 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ift88Q61371 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ift88Q61371 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ift88Q61371 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ift88Q61371 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ift88Q61371 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ift88Q61371 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ift88Q61371 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ift88Q61371 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ift88Q61371 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ift88Q61371 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ift88Q61371 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ift88Q61371 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.22■□□□□ 0.03
Ift88Q61371 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ift88Q61371 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.22■□□□□ 0.03
Ift88Q61371 Gm29541-201ENSMUST00000191351 678 ntBASIC15.22■□□□□ 0.03
Ift88Q61371 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ift88Q61371 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ift88Q61371 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.22■□□□□ 0.03
Ift88Q61371 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ift88Q61371 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ift88Q61371 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ift88Q61371 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ift88Q61371 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ift88Q61371 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ift88Q61371 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.22■□□□□ 0.03
Ift88Q61371 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ift88Q61371 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ift88Q61371 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ift88Q61371 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ift88Q61371 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ift88Q61371 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ift88Q61371 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ift88Q61371 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ift88Q61371 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ift88Q61371 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ift88Q61371 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ift88Q61371 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms