Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Ccdc88aQ5SNZ0 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.69■□□□□ 0.1
Ccdc88aQ5SNZ0 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.69■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm27331-201ENSMUST00000183705 60 ntBASIC15.69■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm9176-201ENSMUST00000219955 1120 ntBASIC15.69■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm18473-201ENSMUST00000220543 868 ntBASIC15.69■□□□□ 0.1
Ccdc88aQ5SNZ0 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.69■□□□□ 0.1
Ccdc88aQ5SNZ0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccdc88aQ5SNZ0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc88aQ5SNZ0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc88aQ5SNZ0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccdc88aQ5SNZ0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc88aQ5SNZ0 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc88aQ5SNZ0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc88aQ5SNZ0 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC15.68■□□□□ 0.1
Ccdc88aQ5SNZ0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
Ccdc88aQ5SNZ0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc88aQ5SNZ0 Mir686-201ENSMUST00000102174 109 ntBASIC15.68■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.68■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC15.68■□□□□ 0.1
Ccdc88aQ5SNZ0 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc88aQ5SNZ0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc88aQ5SNZ0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ccdc88aQ5SNZ0 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc88aQ5SNZ0 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc88aQ5SNZ0 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc88aQ5SNZ0 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc88aQ5SNZ0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ccdc88aQ5SNZ0 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc88aQ5SNZ0 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc88aQ5SNZ0 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.68■□□□□ 0.1
Ccdc88aQ5SNZ0 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc88aQ5SNZ0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm4271-201ENSMUST00000174444 973 ntBASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm18753-201ENSMUST00000201000 566 ntBASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc88aQ5SNZ0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm12203-201ENSMUST00000118235 598 ntBASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm12209-201ENSMUST00000120089 596 ntBASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm13342-201ENSMUST00000121055 207 ntBASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm38223-201ENSMUST00000194484 695 ntBASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm19309-201ENSMUST00000218295 205 ntBASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 CT573034.1-201ENSMUST00000222983 313 ntBASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc88aQ5SNZ0 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms