Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Rc3h1Q4VGL6 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 Gm8652-201ENSMUST00000181363 964 ntBASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 Gm38223-201ENSMUST00000194484 695 ntBASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rc3h1Q4VGL6 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rc3h1Q4VGL6 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rc3h1Q4VGL6 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rc3h1Q4VGL6 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rc3h1Q4VGL6 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Rc3h1Q4VGL6 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.87■□□□□ 0.13
Rc3h1Q4VGL6 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rc3h1Q4VGL6 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rc3h1Q4VGL6 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rc3h1Q4VGL6 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
Rc3h1Q4VGL6 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.87■□□□□ 0.13
Rc3h1Q4VGL6 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Rc3h1Q4VGL6 Gm29608-201ENSMUST00000190444 463 ntBASIC15.87■□□□□ 0.13
Rc3h1Q4VGL6 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.87■□□□□ 0.13
Rc3h1Q4VGL6 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.87■□□□□ 0.13
Rc3h1Q4VGL6 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rc3h1Q4VGL6 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rc3h1Q4VGL6 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rc3h1Q4VGL6 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rc3h1Q4VGL6 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.87■□□□□ 0.13
Rc3h1Q4VGL6 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rc3h1Q4VGL6 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.87■□□□□ 0.13
Rc3h1Q4VGL6 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
Rc3h1Q4VGL6 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Gm12390-201ENSMUST00000117897 397 ntBASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Gm44719-201ENSMUST00000206404 149 ntBASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms