Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.44□□□□□ -0.1
Upf3aQ3ULJ3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Gm12403-201ENSMUST00000121384 959 ntBASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upf3aQ3ULJ3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Gm1335-201ENSMUST00000121653 386 ntBASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Gm19184-201ENSMUST00000196798 928 ntBASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Gm9257-201ENSMUST00000221254 232 ntBASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upf3aQ3ULJ3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms