Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3U1D9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3U1D9 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3U1D9 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Q3U1D9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Q3U1D9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Q3U1D9 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.96□□□□□ -0.5
Q3U1D9 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.5
Q3U1D9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.96□□□□□ -0.5
Q3U1D9 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.96□□□□□ -0.5
Q3U1D9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Q3U1D9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Q3U1D9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Q3U1D9 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Q3U1D9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.96□□□□□ -0.5
Q3U1D9 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Q3U1D9 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Q3U1D9 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.95□□□□□ -0.5
Q3U1D9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.95□□□□□ -0.5
Q3U1D9 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Q3U1D9 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Gm13829-201ENSMUST00000119600 138 ntBASIC11.95□□□□□ -0.5
Q3U1D9 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.95□□□□□ -0.5
Q3U1D9 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.95□□□□□ -0.5
Q3U1D9 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Gm17150-201ENSMUST00000165577 381 ntBASIC11.95□□□□□ -0.5
Q3U1D9 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Gm38223-201ENSMUST00000194484 695 ntBASIC11.95□□□□□ -0.5
Q3U1D9 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Q3U1D9 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.95□□□□□ -0.5
Q3U1D9 Gm18062-201ENSMUST00000208020 547 ntBASIC11.95□□□□□ -0.5
Q3U1D9 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.95□□□□□ -0.5
Q3U1D9 Gm18055-201ENSMUST00000208254 547 ntBASIC11.95□□□□□ -0.5
Q3U1D9 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.95□□□□□ -0.5
Q3U1D9 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Q3U1D9 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Q3U1D9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.95□□□□□ -0.5
Q3U1D9 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Q3U1D9 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
Q3U1D9 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Q3U1D9 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Q3U1D9 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Q3U1D9 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.94□□□□□ -0.5
Q3U1D9 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.94□□□□□ -0.5
Q3U1D9 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Q3U1D9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Q3U1D9 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.94□□□□□ -0.5
Q3U1D9 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.94□□□□□ -0.5
Q3U1D9 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Q3U1D9 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Q3U1D9 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Q3U1D9 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Q3U1D9 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.94□□□□□ -0.5
Q3U1D9 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.94□□□□□ -0.5
Q3U1D9 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.94□□□□□ -0.5
Q3U1D9 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.94□□□□□ -0.5
Q3U1D9 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Q3U1D9 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Q3U1D9 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.94□□□□□ -0.5
Q3U1D9 Gm6244-201ENSMUST00000178732 841 ntBASIC11.94□□□□□ -0.5
Q3U1D9 Gm2445-201ENSMUST00000182798 989 ntBASIC11.94□□□□□ -0.5
Q3U1D9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.94□□□□□ -0.5
Q3U1D9 Gm27486-201ENSMUST00000184923 80 ntBASIC11.94□□□□□ -0.5
Q3U1D9 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Q3U1D9 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Q3U1D9 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Q3U1D9 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Q3U1D9 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Q3U1D9 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Q3U1D9 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Q3U1D9 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
Q3U1D9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms