Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Fndc4Q3TR08 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Fndc4Q3TR08 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Fndc4Q3TR08 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fndc4Q3TR08 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fndc4Q3TR08 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fndc4Q3TR08 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Fndc4Q3TR08 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fndc4Q3TR08 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fndc4Q3TR08 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Gm14822-201ENSMUST00000122247 291 ntBASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fndc4Q3TR08 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fndc4Q3TR08 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.74□□□□□ -0.53
Fndc4Q3TR08 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms