Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Gm16071-201ENSMUST00000119589 793 ntBASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Gm17826-201ENSMUST00000189720 798 ntBASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 AC122305.4-201ENSMUST00000216159 1206 ntBASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Gm15595-201ENSMUST00000120840 961 ntBASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Olfr692-202ENSMUST00000217827 1126 ntBASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Gm13216-201ENSMUST00000117145 591 ntBASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Gm42901-201ENSMUST00000197735 3171 ntBASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Gm6963-201ENSMUST00000147879 379 ntBASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ush2AQ2QI47 Gm10710-201ENSMUST00000047876 3971 ntBASIC7.09□□□□□ -1.28
Ush2AQ2QI47 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Ush2AQ2QI47 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Ush2AQ2QI47 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC7.09□□□□□ -1.28
Ush2AQ2QI47 Gm9507-202ENSMUST00000180157 654 ntBASIC7.09□□□□□ -1.28
Ush2AQ2QI47 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC7.09□□□□□ -1.28
Ush2AQ2QI47 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Ush2AQ2QI47 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Ush2AQ2QI47 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
Ush2AQ2QI47 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
Ush2AQ2QI47 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Gm5870-201ENSMUST00000196461 282 ntBASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Gm23675-201ENSMUST00000157311 125 ntBASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 H2-Q3-201ENSMUST00000172583 608 ntBASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Gm29741-201ENSMUST00000192667 421 ntBASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Gm32999-201ENSMUST00000192693 562 ntBASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ush2AQ2QI47 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms