Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Gm45612-201ENSMUST00000211320 160 ntBASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptchd3Q0EEE2 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptchd3Q0EEE2 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Gm14822-201ENSMUST00000122247 291 ntBASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Gm10275-202ENSMUST00000168697 495 ntBASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Gm18057-201ENSMUST00000208220 503 ntBASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Gm10275-201ENSMUST00000092620 635 ntBASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptchd3Q0EEE2 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms