Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a1Q05722 Gm37469-201ENSMUST00000193728 890 ntBASIC13.52□□□□□ -0.25
Col9a1Q05722 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.52□□□□□ -0.25
Col9a1Q05722 AC131743.3-201ENSMUST00000222099 662 ntBASIC13.52□□□□□ -0.25
Col9a1Q05722 Gm9873-201ENSMUST00000063891 1097 ntBASIC13.52□□□□□ -0.25
Col9a1Q05722 Gm10146-201ENSMUST00000072739 309 ntBASIC13.52□□□□□ -0.25
Col9a1Q05722 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a1Q05722 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a1Q05722 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a1Q05722 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.52□□□□□ -0.25
Col9a1Q05722 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a1Q05722 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a1Q05722 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a1Q05722 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a1Q05722 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Col9a1Q05722 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a1Q05722 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a1Q05722 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a1Q05722 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Col9a1Q05722 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a1Q05722 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a1Q05722 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a1Q05722 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a1Q05722 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a1Q05722 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a1Q05722 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a1Q05722 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a1Q05722 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a1Q05722 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a1Q05722 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Col9a1Q05722 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.51□□□□□ -0.25
Col9a1Q05722 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.51□□□□□ -0.25
Col9a1Q05722 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Olfr362-201ENSMUST00000100144 954 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Col9a1Q05722 Gm12029-201ENSMUST00000120073 832 ntBASIC13.51□□□□□ -0.25
Col9a1Q05722 Gm13665-201ENSMUST00000120830 528 ntBASIC13.51□□□□□ -0.25
Col9a1Q05722 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.51□□□□□ -0.25
Col9a1Q05722 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.51□□□□□ -0.25
Col9a1Q05722 Gm8902-201ENSMUST00000174341 1096 ntBASIC13.51□□□□□ -0.25
Col9a1Q05722 Gm25025-201ENSMUST00000175018 111 ntBASIC13.51□□□□□ -0.25
Col9a1Q05722 Gm26956-201ENSMUST00000182176 986 ntBASIC13.51□□□□□ -0.25
Col9a1Q05722 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.51□□□□□ -0.25
Col9a1Q05722 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 AC132104.1-201ENSMUST00000213615 260 ntBASIC13.51□□□□□ -0.25
Col9a1Q05722 AC132384.10-201ENSMUST00000217862 1204 ntBASIC13.51□□□□□ -0.25
Col9a1Q05722 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Elobl-201ENSMUST00000061938 819 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Prob1-201ENSMUST00000097619 3021 ntBASIC13.51□□□□□ -0.25
Col9a1Q05722 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Col9a1Q05722 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a1Q05722 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Col9a1Q05722 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.5□□□□□ -0.25
Col9a1Q05722 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Col9a1Q05722 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.5□□□□□ -0.25
Col9a1Q05722 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Col9a1Q05722 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Col9a1Q05722 Gm11893-201ENSMUST00000117829 491 ntBASIC13.5□□□□□ -0.25
Col9a1Q05722 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.5□□□□□ -0.25
Col9a1Q05722 Gm11591-201ENSMUST00000120063 702 ntBASIC13.5□□□□□ -0.25
Col9a1Q05722 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col9a1Q05722 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms