Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.87□□□□□ -0.19
Pfdn6Q03958 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pfdn6Q03958 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pfdn6Q03958 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pfdn6Q03958 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pfdn6Q03958 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.87□□□□□ -0.19
Pfdn6Q03958 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pfdn6Q03958 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.87□□□□□ -0.19
Pfdn6Q03958 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pfdn6Q03958 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pfdn6Q03958 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.86□□□□□ -0.19
Pfdn6Q03958 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Gm5425-201ENSMUST00000214125 459 ntBASIC13.86□□□□□ -0.19
Pfdn6Q03958 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.86□□□□□ -0.19
Pfdn6Q03958 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pfdn6Q03958 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Gm25948-201ENSMUST00000175334 112 ntBASIC13.85□□□□□ -0.19
Pfdn6Q03958 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.85□□□□□ -0.19
Pfdn6Q03958 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pfdn6Q03958 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Pfdn6Q03958 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Gm22175-201ENSMUST00000175007 78 ntBASIC13.84□□□□□ -0.19
Pfdn6Q03958 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Gm4804-201ENSMUST00000182234 999 ntBASIC13.84□□□□□ -0.19
Pfdn6Q03958 Gm27533-201ENSMUST00000183800 152 ntBASIC13.84□□□□□ -0.19
Pfdn6Q03958 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pfdn6Q03958 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms