Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn1bP97952 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Scn1bP97952 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Scn1bP97952 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1bP97952 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1bP97952 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1bP97952 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1bP97952 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Scn1bP97952 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1bP97952 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Scn1bP97952 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1bP97952 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Scn1bP97952 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1bP97952 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1bP97952 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1bP97952 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1bP97952 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1bP97952 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1bP97952 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1bP97952 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.58□□□□□ -0.4
Scn1bP97952 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1bP97952 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.58□□□□□ -0.4
Scn1bP97952 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1bP97952 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Scn1bP97952 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.58□□□□□ -0.4
Scn1bP97952 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1bP97952 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.58□□□□□ -0.4
Scn1bP97952 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Scn1bP97952 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.58□□□□□ -0.4
Scn1bP97952 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1bP97952 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1bP97952 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1bP97952 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1bP97952 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1bP97952 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1bP97952 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1bP97952 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn1bP97952 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1bP97952 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1bP97952 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1bP97952 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1bP97952 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1bP97952 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1bP97952 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Scn1bP97952 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Scn1bP97952 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1bP97952 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1bP97952 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.57□□□□□ -0.4
Scn1bP97952 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.57□□□□□ -0.4
Scn1bP97952 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1bP97952 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1bP97952 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1bP97952 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1bP97952 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Scn1bP97952 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.57□□□□□ -0.4
Scn1bP97952 Gm13884-201ENSMUST00000118103 829 ntBASIC12.57□□□□□ -0.4
Scn1bP97952 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.57□□□□□ -0.4
Scn1bP97952 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.57□□□□□ -0.4
Scn1bP97952 Gm18246-201ENSMUST00000221023 728 ntBASIC12.57□□□□□ -0.4
Scn1bP97952 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Scn1bP97952 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1bP97952 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Scn1bP97952 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1bP97952 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1bP97952 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1bP97952 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Scn1bP97952 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1bP97952 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1bP97952 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1bP97952 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.57□□□□□ -0.4
Scn1bP97952 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1bP97952 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1bP97952 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Scn1bP97952 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn1bP97952 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.56□□□□□ -0.4
Scn1bP97952 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Scn1bP97952 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Scn1bP97952 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Scn1bP97952 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.56□□□□□ -0.4
Scn1bP97952 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.56□□□□□ -0.4
Scn1bP97952 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Scn1bP97952 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Scn1bP97952 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn1bP97952 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Scn1bP97952 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.56□□□□□ -0.4
Scn1bP97952 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.56□□□□□ -0.4
Scn1bP97952 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.56□□□□□ -0.4
Scn1bP97952 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.56□□□□□ -0.4
Scn1bP97952 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms