Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Thumpd3P97770 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Thumpd3P97770 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.05□□□□□ -0.16
Thumpd3P97770 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Thumpd3P97770 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thumpd3P97770 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thumpd3P97770 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.04□□□□□ -0.16
Thumpd3P97770 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd3P97770 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd3P97770 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd3P97770 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.04□□□□□ -0.16
Thumpd3P97770 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd3P97770 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd3P97770 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Thumpd3P97770 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Thumpd3P97770 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd3P97770 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd3P97770 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Thumpd3P97770 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd3P97770 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd3P97770 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd3P97770 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.04□□□□□ -0.16
Thumpd3P97770 Gm9824-201ENSMUST00000178707 561 ntBASIC14.04□□□□□ -0.16
Thumpd3P97770 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd3P97770 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Thumpd3P97770 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd3P97770 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd3P97770 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd3P97770 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd3P97770 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd3P97770 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Thumpd3P97770 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Thumpd3P97770 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd3P97770 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd3P97770 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd3P97770 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd3P97770 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd3P97770 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.04□□□□□ -0.16
Thumpd3P97770 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd3P97770 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd3P97770 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd3P97770 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd3P97770 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd3P97770 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd3P97770 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd3P97770 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd3P97770 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd3P97770 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd3P97770 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd3P97770 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.03□□□□□ -0.16
Thumpd3P97770 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.03□□□□□ -0.16
Thumpd3P97770 Gm27321-201ENSMUST00000185021 205 ntBASIC14.03□□□□□ -0.16
Thumpd3P97770 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.03□□□□□ -0.16
Thumpd3P97770 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.03□□□□□ -0.16
Thumpd3P97770 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.03□□□□□ -0.16
Thumpd3P97770 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd3P97770 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd3P97770 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd3P97770 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Thumpd3P97770 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.03□□□□□ -0.16
Thumpd3P97770 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd3P97770 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd3P97770 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd3P97770 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Thumpd3P97770 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd3P97770 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Thumpd3P97770 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.03□□□□□ -0.16
Thumpd3P97770 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd3P97770 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Thumpd3P97770 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Thumpd3P97770 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Thumpd3P97770 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Thumpd3P97770 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Thumpd3P97770 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Thumpd3P97770 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Thumpd3P97770 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Thumpd3P97770 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Thumpd3P97770 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Thumpd3P97770 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Thumpd3P97770 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thumpd3P97770 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Thumpd3P97770 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Thumpd3P97770 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.02□□□□□ -0.17
Thumpd3P97770 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.02□□□□□ -0.17
Thumpd3P97770 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Thumpd3P97770 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Thumpd3P97770 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Thumpd3P97770 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.02□□□□□ -0.17
Thumpd3P97770 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.02□□□□□ -0.17
Thumpd3P97770 Gm27920-201ENSMUST00000183953 96 ntBASIC14.02□□□□□ -0.17
Thumpd3P97770 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.02□□□□□ -0.17
Thumpd3P97770 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thumpd3P97770 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thumpd3P97770 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Thumpd3P97770 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thumpd3P97770 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thumpd3P97770 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thumpd3P97770 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thumpd3P97770 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Thumpd3P97770 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms