Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC17.16■□□□□ 0.34
Smarcc1P97496 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC17.16■□□□□ 0.34
Smarcc1P97496 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc1P97496 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Smarcc1P97496 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc1P97496 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Smarcc1P97496 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Smarcc1P97496 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc1P97496 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc1P97496 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc1P97496 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc1P97496 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc1P97496 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc1P97496 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc1P97496 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc1P97496 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc1P97496 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc1P97496 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc1P97496 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc1P97496 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc1P97496 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC17.15■□□□□ 0.34
Smarcc1P97496 Gm7029-201ENSMUST00000173226 450 ntBASIC17.15■□□□□ 0.34
Smarcc1P97496 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc1P97496 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Smarcc1P97496 Gm7619-201ENSMUST00000210649 1282 ntBASIC17.15■□□□□ 0.34
Smarcc1P97496 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC17.15■□□□□ 0.34
Smarcc1P97496 Gm10146-201ENSMUST00000072739 309 ntBASIC17.15■□□□□ 0.34
Smarcc1P97496 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Smarcc1P97496 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc1P97496 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC17.15■□□□□ 0.34
Smarcc1P97496 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc1P97496 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.15■□□□□ 0.34
Smarcc1P97496 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc1P97496 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc1P97496 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc1P97496 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc1P97496 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcc1P97496 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.15■□□□□ 0.34
Smarcc1P97496 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.14■□□□□ 0.34
Smarcc1P97496 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Smarcc1P97496 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Smarcc1P97496 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc1P97496 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc1P97496 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC17.14■□□□□ 0.33
Smarcc1P97496 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc1P97496 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc1P97496 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc1P97496 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc1P97496 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc1P97496 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.14■□□□□ 0.33
Smarcc1P97496 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc1P97496 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Smarcc1P97496 Gm25261-201ENSMUST00000157416 134 ntBASIC17.14■□□□□ 0.33
Smarcc1P97496 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC17.14■□□□□ 0.33
Smarcc1P97496 CT573086.1-201ENSMUST00000227202 1074 ntBASIC17.14■□□□□ 0.33
Smarcc1P97496 AC154462.2-201ENSMUST00000227519 370 ntBASIC17.14■□□□□ 0.33
Smarcc1P97496 AC131997.1-201ENSMUST00000228611 1229 ntBASIC17.14■□□□□ 0.33
Smarcc1P97496 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc1P97496 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Smarcc1P97496 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc1P97496 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Smarcc1P97496 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc1P97496 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.14■□□□□ 0.33
Smarcc1P97496 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC17.14■□□□□ 0.33
Smarcc1P97496 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc1P97496 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc1P97496 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc1P97496 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc1P97496 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc1P97496 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Smarcc1P97496 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc1P97496 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc1P97496 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc1P97496 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc1P97496 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc1P97496 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.13■□□□□ 0.33
Smarcc1P97496 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Smarcc1P97496 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc1P97496 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC17.13■□□□□ 0.33
Smarcc1P97496 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc1P97496 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc1P97496 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc1P97496 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc1P97496 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc1P97496 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc1P97496 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc1P97496 Gm15544-201ENSMUST00000118776 1531 ntBASIC17.13■□□□□ 0.33
Smarcc1P97496 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc1P97496 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc1P97496 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc1P97496 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC17.13■□□□□ 0.33
Smarcc1P97496 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC17.13■□□□□ 0.33
Smarcc1P97496 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Smarcc1P97496 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc1P97496 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
Smarcc1P97496 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc1P97496 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc1P97496 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc1P97496 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Smarcc1P97496 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms