Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm5P62322 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Lsm5P62322 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm5P62322 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Lsm5P62322 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Lsm5P62322 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm5P62322 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm5P62322 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm5P62322 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm5P62322 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm5P62322 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm5P62322 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.46□□□□□ -0.57
Lsm5P62322 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm5P62322 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Lsm5P62322 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC11.46□□□□□ -0.57
Lsm5P62322 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.46□□□□□ -0.57
Lsm5P62322 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm5P62322 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm5P62322 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Lsm5P62322 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm5P62322 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm5P62322 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm5P62322 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm5P62322 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm5P62322 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm5P62322 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Lsm5P62322 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm5P62322 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm5P62322 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm5P62322 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm5P62322 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm5P62322 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.46□□□□□ -0.58
Lsm5P62322 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm5P62322 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm5P62322 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Lsm5P62322 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm5P62322 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm5P62322 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm5P62322 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Lsm5P62322 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Lsm5P62322 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Lsm5P62322 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC11.45□□□□□ -0.58
Lsm5P62322 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Gm15173-201ENSMUST00000122049 433 ntBASIC11.45□□□□□ -0.58
Lsm5P62322 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Gm16026-204ENSMUST00000162652 683 ntBASIC11.45□□□□□ -0.58
Lsm5P62322 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.45□□□□□ -0.58
Lsm5P62322 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.45□□□□□ -0.58
Lsm5P62322 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.45□□□□□ -0.58
Lsm5P62322 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.45□□□□□ -0.58
Lsm5P62322 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Lsm5P62322 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Lsm5P62322 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm5P62322 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Lsm5P62322 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm5P62322 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm5P62322 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm5P62322 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm5P62322 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm5P62322 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm5P62322 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm5P62322 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm5P62322 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm5P62322 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Lsm5P62322 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm5P62322 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm5P62322 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lsm5P62322 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms