Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Lsm3P62311 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Lsm3P62311 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Lsm3P62311 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm3P62311 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm3P62311 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm3P62311 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm3P62311 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm3P62311 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm3P62311 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm3P62311 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm3P62311 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Lsm3P62311 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm3P62311 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.52□□□□□ -0.41
Lsm3P62311 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm3P62311 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm3P62311 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm3P62311 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm3P62311 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.52□□□□□ -0.41
Lsm3P62311 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm3P62311 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Lsm3P62311 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm3P62311 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.52□□□□□ -0.41
Lsm3P62311 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.52□□□□□ -0.41
Lsm3P62311 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Lsm3P62311 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm3P62311 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.52□□□□□ -0.41
Lsm3P62311 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm3P62311 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lsm3P62311 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm3P62311 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm3P62311 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm3P62311 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm3P62311 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lsm3P62311 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.52□□□□□ -0.41
Lsm3P62311 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Lsm3P62311 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm3P62311 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm3P62311 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.52□□□□□ -0.41
Lsm3P62311 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm3P62311 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm3P62311 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lsm3P62311 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm3P62311 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.51□□□□□ -0.41
Lsm3P62311 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Lsm3P62311 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lsm3P62311 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.51□□□□□ -0.41
Lsm3P62311 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.51□□□□□ -0.41
Lsm3P62311 Gm12644-201ENSMUST00000119935 606 ntBASIC12.51□□□□□ -0.41
Lsm3P62311 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.51□□□□□ -0.41
Lsm3P62311 Gm7977-201ENSMUST00000193787 748 ntBASIC12.51□□□□□ -0.41
Lsm3P62311 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Lsm3P62311 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lsm3P62311 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Lsm3P62311 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Lsm3P62311 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.51□□□□□ -0.41
Lsm3P62311 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm3P62311 Matn2-203ENSMUST00000226766 3252 ntBASIC12.5□□□□□ -0.41
Lsm3P62311 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm3P62311 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.5□□□□□ -0.41
Lsm3P62311 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm3P62311 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm3P62311 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm3P62311 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm3P62311 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Lsm3P62311 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm3P62311 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm3P62311 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm3P62311 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm3P62311 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.5□□□□□ -0.41
Lsm3P62311 Gm15372-201ENSMUST00000120729 834 ntBASIC12.5□□□□□ -0.41
Lsm3P62311 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Lsm3P62311 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms