Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm24169-201ENSMUST00000180244 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm23689-201ENSMUST00000180354 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm27359-201ENSMUST00000184153 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm27785-201ENSMUST00000184268 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm27466-201ENSMUST00000184396 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm27703-201ENSMUST00000184836 110 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Sec61a1P61620 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.17□□□□□ -0.46
Sec61a1P61620 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Sec61a1P61620 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.17□□□□□ -0.46
Sec61a1P61620 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sec61a1P61620 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Sec61a1P61620 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.17□□□□□ -0.46
Sec61a1P61620 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Sec61a1P61620 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a1P61620 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Sec61a1P61620 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.16□□□□□ -0.46
Sec61a1P61620 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sec61a1P61620 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.16□□□□□ -0.46
Sec61a1P61620 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sec61a1P61620 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sec61a1P61620 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sec61a1P61620 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.16□□□□□ -0.46
Sec61a1P61620 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sec61a1P61620 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Gm2810-201ENSMUST00000118681 990 ntBASIC12.16□□□□□ -0.46
Sec61a1P61620 Gm15920-201ENSMUST00000118998 402 ntBASIC12.16□□□□□ -0.46
Sec61a1P61620 Gm13464-201ENSMUST00000119418 935 ntBASIC12.16□□□□□ -0.46
Sec61a1P61620 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Auts2-212ENSMUST00000178555 309 ntBASIC12.16□□□□□ -0.46
Sec61a1P61620 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.16□□□□□ -0.46
Sec61a1P61620 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Gm5779-201ENSMUST00000218467 910 ntBASIC12.16□□□□□ -0.46
Sec61a1P61620 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sec61a1P61620 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a1P61620 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.16□□□□□ -0.46
Sec61a1P61620 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a1P61620 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.15□□□□□ -0.46
Sec61a1P61620 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sec61a1P61620 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sec61a1P61620 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a1P61620 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a1P61620 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a1P61620 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a1P61620 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a1P61620 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a1P61620 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a1P61620 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
Sec61a1P61620 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.15□□□□□ -0.46
Sec61a1P61620 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a1P61620 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a1P61620 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a1P61620 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
Sec61a1P61620 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a1P61620 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.15□□□□□ -0.46
Sec61a1P61620 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a1P61620 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a1P61620 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.15□□□□□ -0.46
Sec61a1P61620 Gm10253-201ENSMUST00000194270 940 ntBASIC12.15□□□□□ -0.46
Sec61a1P61620 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a1P61620 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a1P61620 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms