Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.09□□□□□ -0.15
Tubgcp3P58854 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tubgcp3P58854 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Tubgcp3P58854 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tubgcp3P58854 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Tubgcp3P58854 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tubgcp3P58854 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubgcp3P58854 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tubgcp3P58854 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubgcp3P58854 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubgcp3P58854 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Tubgcp3P58854 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubgcp3P58854 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.08□□□□□ -0.16
Tubgcp3P58854 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Tubgcp3P58854 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubgcp3P58854 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubgcp3P58854 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tubgcp3P58854 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tubgcp3P58854 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.08□□□□□ -0.16
Tubgcp3P58854 Gm6888-201ENSMUST00000221983 706 ntBASIC14.08□□□□□ -0.16
Tubgcp3P58854 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubgcp3P58854 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.08□□□□□ -0.16
Tubgcp3P58854 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubgcp3P58854 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubgcp3P58854 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubgcp3P58854 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubgcp3P58854 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Tubgcp3P58854 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubgcp3P58854 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubgcp3P58854 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tubgcp3P58854 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubgcp3P58854 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.08□□□□□ -0.16
Tubgcp3P58854 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubgcp3P58854 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tubgcp3P58854 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tubgcp3P58854 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.07□□□□□ -0.16
Tubgcp3P58854 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubgcp3P58854 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tubgcp3P58854 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubgcp3P58854 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tubgcp3P58854 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubgcp3P58854 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Tubgcp3P58854 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Tubgcp3P58854 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.07□□□□□ -0.16
Tubgcp3P58854 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubgcp3P58854 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tubgcp3P58854 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Tubgcp3P58854 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.07□□□□□ -0.16
Tubgcp3P58854 Gm44344-201ENSMUST00000200287 129 ntBASIC14.07□□□□□ -0.16
Tubgcp3P58854 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.07□□□□□ -0.16
Tubgcp3P58854 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubgcp3P58854 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubgcp3P58854 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Tubgcp3P58854 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.07□□□□□ -0.16
Tubgcp3P58854 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tubgcp3P58854 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubgcp3P58854 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Tubgcp3P58854 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.07□□□□□ -0.16
Tubgcp3P58854 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Tubgcp3P58854 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Tubgcp3P58854 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Tubgcp3P58854 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tubgcp3P58854 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Tubgcp3P58854 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubgcp3P58854 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubgcp3P58854 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Tubgcp3P58854 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.06□□□□□ -0.16
Tubgcp3P58854 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.06□□□□□ -0.16
Tubgcp3P58854 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubgcp3P58854 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubgcp3P58854 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubgcp3P58854 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubgcp3P58854 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubgcp3P58854 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubgcp3P58854 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubgcp3P58854 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubgcp3P58854 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubgcp3P58854 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubgcp3P58854 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tubgcp3P58854 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tubgcp3P58854 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Tubgcp3P58854 Gm17837-201ENSMUST00000186435 985 ntBASIC14.06□□□□□ -0.16
Tubgcp3P58854 Gm21470-201ENSMUST00000187680 696 ntBASIC14.06□□□□□ -0.16
Tubgcp3P58854 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tubgcp3P58854 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms