Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tpm1P58771 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tpm1P58771 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tpm1P58771 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.35■□□□□ 0.05
Tpm1P58771 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Tpm1P58771 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tpm1P58771 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tpm1P58771 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tpm1P58771 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.35■□□□□ 0.05
Tpm1P58771 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.35■□□□□ 0.05
Tpm1P58771 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.35■□□□□ 0.05
Tpm1P58771 Gm44608-201ENSMUST00000206827 855 ntBASIC15.35■□□□□ 0.05
Tpm1P58771 Gm7461-201ENSMUST00000058918 827 ntBASIC15.35■□□□□ 0.05
Tpm1P58771 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Tpm1P58771 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tpm1P58771 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tpm1P58771 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tpm1P58771 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Tpm1P58771 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tpm1P58771 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tpm1P58771 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tpm1P58771 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tpm1P58771 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Tpm1P58771 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tpm1P58771 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.35■□□□□ 0.05
Tpm1P58771 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Tpm1P58771 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.34■□□□□ 0.05
Tpm1P58771 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Tpm1P58771 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Tpm1P58771 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tpm1P58771 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tpm1P58771 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Tpm1P58771 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tpm1P58771 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Tpm1P58771 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.34■□□□□ 0.05
Tpm1P58771 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tpm1P58771 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tpm1P58771 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Tpm1P58771 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tpm1P58771 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.34■□□□□ 0.05
Tpm1P58771 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tpm1P58771 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tpm1P58771 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.34■□□□□ 0.05
Tpm1P58771 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tpm1P58771 Gm12350-201ENSMUST00000121208 462 ntBASIC15.34■□□□□ 0.05
Tpm1P58771 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tpm1P58771 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.34■□□□□ 0.05
Tpm1P58771 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.34■□□□□ 0.05
Tpm1P58771 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Tpm1P58771 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tpm1P58771 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Tpm1P58771 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Tpm1P58771 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tpm1P58771 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tpm1P58771 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tpm1P58771 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.34■□□□□ 0.05
Tpm1P58771 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tpm1P58771 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tpm1P58771 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tpm1P58771 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC15.33■□□□□ 0.05
Tpm1P58771 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Tpm1P58771 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Tpm1P58771 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tpm1P58771 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Tpm1P58771 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tpm1P58771 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tpm1P58771 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Tpm1P58771 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tpm1P58771 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Tpm1P58771 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tpm1P58771 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tpm1P58771 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tpm1P58771 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.33■□□□□ 0.04
Tpm1P58771 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Tpm1P58771 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.33■□□□□ 0.04
Tpm1P58771 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tpm1P58771 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.33■□□□□ 0.04
Tpm1P58771 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tpm1P58771 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tpm1P58771 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tpm1P58771 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tpm1P58771 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tpm1P58771 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tpm1P58771 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tpm1P58771 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Tpm1P58771 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tpm1P58771 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tpm1P58771 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tpm1P58771 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tpm1P58771 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tpm1P58771 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tpm1P58771 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tpm1P58771 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.32■□□□□ 0.04
Tpm1P58771 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Tpm1P58771 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tpm1P58771 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.32■□□□□ 0.04
Tpm1P58771 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tpm1P58771 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tpm1P58771 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tpm1P58771 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms