Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SftpbP50405 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SftpbP50405 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SftpbP50405 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SftpbP50405 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SftpbP50405 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.1□□□□□ -0.15
SftpbP50405 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SftpbP50405 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.1□□□□□ -0.15
SftpbP50405 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
SftpbP50405 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SftpbP50405 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.1□□□□□ -0.15
SftpbP50405 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.1□□□□□ -0.15
SftpbP50405 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SftpbP50405 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpbP50405 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.1□□□□□ -0.15
SftpbP50405 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.1□□□□□ -0.15
SftpbP50405 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.09□□□□□ -0.15
SftpbP50405 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SftpbP50405 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SftpbP50405 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SftpbP50405 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.09□□□□□ -0.15
SftpbP50405 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.09□□□□□ -0.15
SftpbP50405 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 Gm9824-201ENSMUST00000178707 561 ntBASIC14.09□□□□□ -0.15
SftpbP50405 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.09□□□□□ -0.15
SftpbP50405 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 Gm18027-201ENSMUST00000218947 619 ntBASIC14.09□□□□□ -0.15
SftpbP50405 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.09□□□□□ -0.15
SftpbP50405 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SftpbP50405 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpbP50405 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SftpbP50405 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SftpbP50405 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SftpbP50405 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SftpbP50405 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SftpbP50405 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SftpbP50405 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SftpbP50405 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SftpbP50405 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SftpbP50405 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SftpbP50405 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.08□□□□□ -0.16
SftpbP50405 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SftpbP50405 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SftpbP50405 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.08□□□□□ -0.16
SftpbP50405 Gm43125-201ENSMUST00000201724 730 ntBASIC14.08□□□□□ -0.16
SftpbP50405 Gm6443-201ENSMUST00000203599 874 ntBASIC14.08□□□□□ -0.16
SftpbP50405 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SftpbP50405 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SftpbP50405 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms